EX-99.1 3 a04-3667_1ex99d1.htm EX-99.1

Exhibit 99.1

 

 

Link to searchable text of slide shown above

 


 

Link to searchable text of slide shown above

 


 

 

Link to searchable text of slide shown above

 


 

 

Link to searchable text of slide shown above

 


 

 

Link to searchable text of slide shown above

 


 

 

Link to searchable text of slide shown above

 


 

 

Link to searchable text of slide shown above

 


 

 

Link to searchable text of slide shown above

 


 

 

Link to searchable text of slide shown above

 


 

 

Link to searchable text of slide shown above

 


 

 

Link to searchable text of slide shown above

 


 

 

Link to searchable text of slide shown above

 


 

 

Link to searchable text of slide shown above

 


 

 

Link to searchable text of slide shown above

 


 

 

Link to searchable text of slide shown above

 


 

 

Link to searchable text of slide shown above

 


 

 

Link to searchable text of slide shown above

 


 

 

Link to searchable text of slide shown above

 


 

 

Link to searchable text of slide shown above

 


 

 

Link to searchable text of slide shown above

 


 

 

Link to searchable text of slide shown above

 


 

 

Link to searchable text of slide shown above

 


Searchable text section of graphics shown above

 



 

Gene Editing: A Next Generation Target Validation and Functional Genomics Technology

 

Al Renzi, Vice President of Corporate Development

 

March 23, 2004

 

[LOGO]

 



 

Forward Looking Statements

 

The statements in this presentation that are not historical facts are forward-looking statements that represent management’s beliefs and assumptions as of the date of this presentation, based on currently available information. Forward-looking statements can be identified by the use of words such as “believes,” “intends,” “estimates,” “may,” “will,” “should,” “anticipated,” “expected” or comparable terminology or by discussions of strategy. Although the Company believes that the expectations reflected in such forward-looking statements are reasonable, it cannot assure that these expectations will prove to be correct. Such statements involve risks and uncertainties including those factors identified under the captions “Risk Factors,” “Special Note Regarding Forward Looking Statements” or “Cautionary Note Regarding Forward Looking Statements” in the Company’s documents filed from time to time with the SEC, including the Company’s Current Report on Form 8-K/A, dated February 11, 2004, and its Annual Report on Form 10-K for the year ending December 31, 2003 filed with the SEC on March 11, 2004.  Should one or more of these risks materialize (or the consequences of such a development worsen), or should the underlying assumptions prove incorrect, actual results could differ materially from those forecasted or expected. The Company disclaims any intention or obligation to update publicly or revise such statements whether as a result of new information, future events or otherwise.

 

For further information, please contact L. Robert Cohen, Vice President, Investor Relations of NaPro BioTherapeutics, Inc., +1-212-218-8715.

 



 

Pre-Clinical Development Pipeline

 

Oncology Products

 

Potential Indications

 

 

 

                  NBT-287

 

Breast Cancer
Small Cell Lung Cancer
Pancreatic Cancer
Ovarian Cancer
Neuroblastoma

 

 

 

                  NBT-273

 

Breast Cancer
Multiple Myeloma
Pancreatic Cancer
Squamous Cell Carcinomas

 

 

 

                  BBN Taxane

 

Small Cell Lung Cancer
Prostate Cancer
Pancreatic Cancer
Gastrointestinal Cancers

 

 

 

                  HN-1 Taxane

 

Head and Neck Cancer
Non-Small Cell Lung Cancer
Squamous Cell Carcinomas

 

Gene Editing Products

 

Indications

 

 

 

•     Oligo/Cell Therapy

 

Sickle Cell Disease

•     Oligo Therapy

 

Huntington’s Disease

 



 

Strategy

 

To establish NaPro’s Gene Editing Technology as the platform of choice for………….

 

             Therapeutic treatment of genetic disorders

             Gene function analysis model systems as it relates to target validation and drug discovery

             Development of molecular diagnostic tools for determination of existence, predisposition, and progression of disease states characterized by distinct sets of genetic mutations (SNPs & Haplotypes)

 



 

Gene Editing Single Strand
Oligodeoxynucleotide (ssODN)

 

A synthetic oligodeoxynucleotide polymer with a modified backbone

 

[GRAPHIC]

 

                  Easily synthesized

                  Nuclease resistant

                  Enzymatically active¾repair competent

                  Directs inheritable single nucleotide changes

                  Non-integrating like homologous recombination

                  Follows antisense therapy ADME routes

 



 

The Process of “Gene Editing”

 

[GRAPHIC]

 

                  Modified ssODN vectors are designed to be mismatched with a target sequence

 

                  The vector pairs with complimentary sequences to create a D-loop intermediate. The mismatch between the vector and target DNA creates a bulge that is recognized by the cell’s repair mechanism

 

                  The vector directs the repair of the mismatched target

 

                  A second repair event resolves the resulting mismatched complementary strand

 



 

Functional Genomic Technology Comparison

 

Feature

 

Gene Editing

 

RNAi

 

Homologous
Recombination

 

Transgenics

 

 

 

 

 

 

 

 

 

 

 

Creation of Single Nucleotide Variants

 

ý

 

o

 

o

 

o

 

 

 

 

 

 

 

 

 

 

 

Knock Out Capability

 

ý

 

o

 

ý

 

o

 

 

 

 

 

 

 

 

 

 

 

Knock Down Capability

 

ý

 

ý

 

o

 

o

 

 

 

 

 

 

 

 

 

 

 

Up Regulation Capability

 

ý

 

o

 

o

 

ý

 

 

 

 

 

 

 

 

 

 

 

Permanent Alteration

 

ý

 

o

 

ý

 

ý

 

 

 

 

 

 

 

 

 

 

 

Foreign DNA Integration

 

o

 

ý

 

ý

 

ý

 

 



 

Advantages of Gene Editing over Viral Gene Therapy

 

FEATURE

 

BENEFIT

 

 

 

PRECISION

 

Single base pair change

 

 

 

SPECIFICITY

 

No random integration of foreign DNA

 

 

 

INTEGRITY

 

Maintain genetic context

 

 

 

STABILITY

 

Permanent expression alteration

 

 

 

IMMUNOGENICITY

 

No viral antigens

 

 

 

BROAD APPLICABILITY

 

Applicable to many diseased tissues

 



 

Gene Editing for Functional Genomics and Target Validation in Mammals

 

[GRAPHIC]

 

1. ssMOV is delivered to the target cell and enters nucleus

 

2. Pairs with homologous gene target, invades DNA and converts desired base

 

3. Cell exhibits a phenotypic change and can be used in functional analysis for target validation, disease models and drug screening

 



 

Mammalian Gene Editing: Our Test System

 

                  A mutant eGFP gene, containing a single nonsense codon, was integrated into several cell lines (1-2 copies per genome)

 

[GRAPHIC]

 

mt

eGFP

5’-TGACCTAGGGCGTGC-3’

 

 

 

wt

eGFP

5’-TGACCTACGGCGTGC-3’

 

                  Cells integrated with a wt eGFP construct exhibit green fluorescence phenotype while cells integrated with the mt eGFP do not

 

wt

 

[GRAPHIC]

 

[GRAPHIC]

 

mt

 



 

eGFP Conversion Detected by FACS

 

                  Gene Editing ssODNs can restore the green fluorescence phenotype by correcting the nonsense mutation in eGFP which can be detected by microscopy or FACS

 

[GRAPHIC]

 

48 hrs. Post Transfection cells are harvested, treated with PI and assayed by FACS

 



 

Chromosomal Correction in Mammalian Cells

 

Histograms generated from flow cytometric analysis for 2 mt eGFP integrated cell clones after 1 treatment with ssODN

 

Condition 1

 

[CHART]

 

Quadrant

 

%Total

 

Dead, Uncorrected

 

4.45

 

Dead, Corrected

 

0.12

 

Alive, Uncorrected

 

94.19

 

Alive, Corrected

 

1.24

 

 

Condition 2

 

[CHART]

 

Quadrant

 

%Total

 

Dead, Uncorrected

 

22.53

 

Dead, Corrected

 

2.09

 

Alive, Uncorrected

 

70.57

 

Alive, Corrected

 

4.81

 

 

Condition 3

 

[CHART]

 

Quadrant

 

%Total

 

Dead, Uncorrected

 

5.12

 

Dead, Corrected

 

0.74

 

Alive, Uncorrected

 

83.74

 

Alive, Corrected

 

10.41

 

 



 

Potential Therapeutic Applications

 

 

 

Hematology

 

Sickle Cell Disease

Beta-Thalassemia

Hemophilia B

 

 

 

 

 

 

 

 

 

Neurological

 

Huntington Chorea

Familial Amyloidotic

Polyneuropathy (FAP)

 

 

 

 

 

 

 

Gene Editing Therapeutics

 

Metabolic

 

Pompe’s Disease

Fabry’s disease

Criggler-Najjar Type

Renal Tubular Acidosis

Tyrosinemia

 

 

 

 

 

 

 

 

 

Musculoskeletal

 

Muscular

Dystrophy

Hypophosphatasia

 

 

 

 

 

 

 

 

 

Cardiovascular

 

Hypercholesterolemia

 

 



 

Correction of Pompe Mutation in Human
α-D-Glucosidase Gene

 

                  Strategy: to correct the mutation responsible for Pompe’s Disease using ssODNs in primary human fibroblasts

 

                  Gene Editing ssODNs are designed to correct and restore α-D-glucosidase activity by replacing a single nucleotide

 

 

 

1935C

 

 

 

mt α-D-glucosidase gene sequence of Pompe patient

 

- - - - - - GGGGCCGAAGTCTGC - - - - - - -

 

 

 

Sense mutagenic ssODNs

 

5’-ggtCGGGGCCGACGTCTGCGGCTTCttc-3’

 

 

5’-cctCTGGTCGGGGCCGACGTCTGCGGCTTCTTCCTggg-3’

 

 

 

Antisense mutagenic ssODNs

 

5’-gaaGCCGCAGACGTCGGCCCCGacc-3’

 

 

5’-cccAGGAAGCCGCAGACGTCGGCCCCGACCAGagg-3’

 


*I-L Lu et. al. Gene Therapy (2003)10:1910-1916

 



 

Correction of Human Pompe Mutation and α-D-glucosidase Activity

 

                  Restoration of wt α-D-glucosidase expression and activity after 3 repeat treatments with ssODN

 

[CHART]

 

cDNA generated from Pompe patient indicates gene correction on the nucleic acid level.

 

[CHART]

 

Increased Enzymatic α-D-glucosidase activity corresponds to gene correction levels

 


*I-L Lu et. al. Gene Therapy (2003)10:1910-1916

 



 

In Vivo Creation of Pompe Phenotype in Mouse Liver

 

                  Strategy: to create a phenotypic mouse model of Pompe’s Disease using ssODNs

 

                  Gene Editing ssMOVs are designed to functionally knock out α-D-glucosidase activity by replacing a single nucleotide

 

 

 

2063 T

 

 

 

Murine WT α-D-glucosidase

 

-----ATCTGCGGCTTCATAGGAGACACGTCAGAA-----

 

 

 

Sense mutagenic ssODN

 

5’-agaTCTGCGGCTTCATATGAGACAGGTCAGAAgag-3’

 

 

 

Antisense mutagenic ssODN

 

5’-ctcTTCTGACGTGTCTCATATGAAGCCGCAGAtct-3’

 

                  BALB/c mice were dosed with 115µg ssODN once every other day for 6 days

 

                  Animals were sacrificed two weeks after last dose

 


*I-L Lu et. al. Gene Therapy (2003)10:1910-1916

 



 

Confirmation of Targeted α-D-glucosidase Alteration in Mice

 

Allele-specific PCR detects the targeted change in mRNA derived from mouse liver and kidney tissues

 

[GRAPHIC]

 


*I-L Lu et. al. Gene Therapy (2003)10:1910-1916

 



 

Phenotypic Confirmation of Glycogen Accumulation (Pompe Phenotype)

 

[GRAPHIC]

 


*I-L Lu et. al. Gene Therapy (2003)10:1910-1916

 



 

Sickle Cell Anemia Therapeutic Strategy

 

                  Repair Target:

                  T to A correction in the 6th codon of the b-globin gene

 

                  Target cells:

                  Autologous Human Progenitor/Stem Cells

 

                  Treatment:

                  Ex-vivo transfection of cells with ssDNA and re-introduction to patient

 

                  Result:

                  Production of normal hemoglobin from repaired gene with patient’s own cells

 



 

Sickle Cell AutologousTreatment

 

[GRAPHIC]

 



 

Gene Editing Summary

 

                  Gene editing platform can be leveraged across a broad range of disease areas and in target validation

 

                  Gene editing may be a useful tool in conjunction with RNAi to knock out genes of interest

 

                  Gene editing also provides the opportunity to up-regulate or down regulate a gene, offering a broader suite of  opportunities for research and target validation

 

                  Established publication base

 

                  Comprehensive IP portfolio & strategy

 



 

A life science company focused on the development of therapies for the treatment of cancer and hereditary disease

 

[LOGO]