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Consolidated Statements of Operations (USD $)
3 Months Ended 6 Months Ended 131 Months Ended
Mar. 31, 2014
Mar. 31, 2013
Mar. 31, 2014
Mar. 31, 2013
Mar. 31, 2014
Statement Consolidated Statements Of Operations [Line Items]          
REVENUE $ 43,750 $ 43,750 $ 87,500 $ 202,766 $ 4,516,600
OPERATING EXPENSES          
Salaries and payroll-related costs 3,097,902 1,725,176 5,179,693 3,354,599 38,239,492
General and administrative expenses 1,347,677 779,970 2,261,461 1,697,646 37,103,540
Research and development 5,216,446 2,125,019 8,349,460 3,701,685 59,673,835
Stock-based compensation 1,198,444 355,108 1,719,582 750,782 16,837,321
Depreciation and amortization 395,779 448,765 799,184 898,362 9,959,882
Impairment expense         1,308,047
Contingent consideration - fair value adjustments         1,421,652
TOTAL OPERATING EXPENSES 11,256,248 5,434,038 18,309,380 10,403,074 164,543,769
OPERATING LOSS (11,212,498) (5,390,288) (18,221,880) (10,200,308) (160,027,169)
OTHER INCOME (EXPENSE)          
Equity in income (loss) of unconsolidated affiliates (9,597) (157,612) (148,053) (221,169) (1,752,601)
Impairment of investment in unconsolidated affiliates         (1,642,775)
Gain on purchase of Roche Madison         1,576,107
Gain (loss) on sale of fixed assets, net (5,316) (54,932) (58,878) (36,440) (1,341,731)
Realized and unrealized gain (loss) in marketable securities         62,954
Interest income (expense), net 119,390 (27,567) 159,968 (20,151) 2,812,502
Change in value of derivatives (2,951,225) (29,403) (6,470,803) 14,873 (8,489,788)
Gain on sale of stock in subsidiary         2,292,800
Other income (expense) 76,546 (1,279,881) 71,215 (1,257,196) (676,760)
TOTAL OTHER INCOME (EXPENSE) (2,770,202) (1,549,395) (6,446,551) (1,520,083) (7,159,292)
LOSS FROM CONTINUING OPERATIONS BEFORE INCOME TAXES (13,982,700) (6,939,683) (24,668,431) (11,720,391) (167,186,461)
Provision for income taxes               
LOSS FROM CONTINUING OPERATIONS (13,982,700) (6,939,683) (24,668,431) (11,720,391) (167,186,461)
Income (loss) from discontinued operations   (336)   (354) (47,546,996)
Gain on disposal of discontinued operations         4,708,588
NET INCOME (LOSS) FROM DISCONTINUED OPERATIONS   (336)   (354) (42,838,408)
NET LOSS (13,982,700) (6,940,019) (24,668,431) (11,720,745) (210,024,869)
Net loss attributable to noncontrolling interests 40,179 182,082 97,600 348,650 19,477,029
NET LOSS ATTRIBUTABLE TO ARROWHEAD $ (13,942,521) $ (6,757,937) $ (24,570,831) $ (11,372,095) $ (190,547,840)
NET LOSS PER SHARE ATTRIBUTABLE TO ARROWHEAD SHAREHOLDERS - BASIC & DILUTED: $ (0.31) $ (0.41) $ (0.60) $ (0.74)  
Weighted average shares outstanding - basic and diluted 44,321,847 16,461,693 40,941,903 15,272,703