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Condensed Consolidated Statements of Cash Flows (USD $)
In Thousands, unless otherwise specified
3 Months Ended
Mar. 31, 2013
Mar. 31, 2012
Cash flows from operating activities:    
Net loss $ (15,669) $ (45,426)
Adjustments to reconcile net loss to net cash provided by (used in) operating activities:    
Depreciation and amortization of debt discounts 7,734 7,234
Stock-based compensation 9,197 9,932
Realized gain on marketable securities (15)  
Changes in operating assets and liabilities:    
Accounts receivable 42,910 (6,595)
Prepaid expenses and other assets (837) 29
Inventory (577) 23
Accounts payable 1,554 (1,765)
Accrued and other current liabilities (2,820) (4,776)
Deferred revenue - Product revenues   3,673
Deferred revenue - Collaborative agreements (16,739) (16,730)
Net cash provided by (used in) operating activities 24,738 (54,401)
Cash flows from investing activities:    
Capital expenditures (894) (496)
Sales and maturities of marketable securities 136 167
Net cash used in investing activities (758) (329)
Cash flows from financing activities:    
Proceeds from issuance of common stock under stock plans 17,777 13,421
Net cash provided by financing activities 17,777 13,421
Net increase (decrease) in cash and cash equivalents 41,757 (41,309)
Cash and cash equivalents at beginning of period 224,057 273,164
Cash and cash equivalents at end of period $ 265,814 $ 231,855