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Income Taxes (Details) (USD $)
3 Months Ended 9 Months Ended 3 Months Ended 9 Months Ended 3 Months Ended 9 Months Ended 3 Months Ended 9 Months Ended
Sep. 30, 2013
Sep. 30, 2012
Sep. 30, 2013
Sep. 30, 2012
Dec. 31, 2012
Sep. 30, 2013
Total Vertex Shareholders' Equity
Sep. 30, 2013
Total Vertex Shareholders' Equity
Sep. 30, 2013
Noncontrolling Interest (Alios)
Sep. 30, 2012
Noncontrolling Interest (Alios)
Sep. 30, 2013
Noncontrolling Interest (Alios)
Sep. 30, 2012
Noncontrolling Interest (Alios)
Sep. 30, 2013
Alios Bio Pharma Inc
Jun. 30, 2012
Alios Bio Pharma Inc
Sep. 30, 2013
Alios Bio Pharma Inc
Sep. 30, 2012
Alios Bio Pharma Inc
Dec. 31, 2012
Alios Bio Pharma Inc
Tax Carryforwards                                
Provision for (benefit from) income taxes $ (751,000) $ 21,355,000 $ (132,863,000) $ 41,450,000   $ 2,600,000 $ (123,800,000) $ (3,300,000)   $ (9,100,000)   $ (3,306,000) $ 21,394,000 $ (9,089,000) $ 40,354,000  
Current State and Local Tax Expense (Benefit)   0   1,100,000         21,400,000   40,400,000          
Intangible asset impairment charge 0 0 412,900,000 0                        
Deferred federal income tax expense (benefit)     127,600,000                          
Deferred tax liability 150,203,000 [1]   150,203,000 [1]   280,367,000 [1]             150,203,000   150,203,000   152,781,000
Federal income tax net operating loss carryfowards         2,600,000,000                      
Income taxes payable                       0   0    
Federal income tax credit carryforwards         98,000,000                      
State income tax net operating loss carryforwards         1,500,000,000                      
State income tax credit credit carryforwards         $ 60,300,000                      
[1] Amounts include the assets and liabilities of Vertex’s variable interest entity (“VIE”), Alios BioPharma, Inc. (“Alios”). Vertex’s interests and obligations with respect to the VIE’s assets and liabilities are limited to those accorded to Vertex in its agreement with Alios. See Note C, "Collaborative Arrangements," to these condensed consolidated financial statements for amounts.