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CONDENSED CONSOLIDATED BALANCE SHEETS (Unaudited) - USD ($)
$ in Thousands
Sep. 30, 2015
Dec. 31, 2014
Current assets:    
Cash and cash equivalents $ 126,593 $ 142,998
Short-term investments 685,599 585,834
Contracts receivable 1,826 3,903
Inventories 6,583 6,290
Investment in Regulus Therapeutics Inc. 18,594 81,881
Other current assets 29,066 15,691
Total current assets 868,261 836,597
Property, plant and equipment, net 89,243 88,958
Licenses, net 1,285 2,690
Patents, net 19,489 17,186
Deposits and other assets 9,727 10,378
Total assets 988,005 955,809
Current liabilities:    
Accounts payable 19,294 17,984
Accrued compensation 9,508 12,302
Accrued liabilities 24,487 30,451
Current portion of long-term obligations 773 2,882
Current portion of deferred contract revenue 68,136 51,713
Total current liabilities 122,198 115,332
Long-term deferred contract revenue 149,100 127,797
Long-term obligations, less current portion 7,312 7,669
Long-term financing liability for leased facility 72,091 71,731
Total liabilities 742,591 698,029
Stockholders' equity:    
Common stock, $0.001 par value; 300,000,000 shares authorized, 120,028,312 and 118,442,726 shares issued and outstanding at September 30, 2015 and December 31, 2014, respectively 120 118
Additional paid-in capital 1,286,690 1,224,509
Accumulated other comprehensive (loss) income (17,957) 39,747
Accumulated deficit (1,023,439) (1,006,594)
Total stockholders' equity 245,414 257,780
Total liabilities and stockholders' equity 988,005 955,809
1 Percent Convertible Senior Notes [Member]    
Current liabilities:    
Convertible senior notes 342,136 327,486
2 3/4 Percent Convertible Senior Notes [Member]    
Current liabilities:    
Convertible senior notes $ 49,754 $ 48,014