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CONSOLIDATED STATEMENTS OF CASH FLOWS - USD ($)
$ in Thousands
12 Months Ended
Dec. 31, 2020
Dec. 31, 2019
Dec. 31, 2018
Cash flows from operating activities:      
Net loss $ (44,372) $ (104,133) $ (168,843)
Adjustments to reconcile net loss to net cash used for operating activities:      
Non-cash royalty revenue related to sale of future royalties (68,529) (47,415) (32,154)
Non-cash interest expense on liability related to sale of future royalties and convertible senior notes 23,107 16,879 10,631
Depreciation and amortization 2,101 4,028 7,411
(Gain) loss on sale/disposal of fixed assets and impairment charges (691) 1,689 115
Operating lease right-of-use asset impairment   694  
Stock and deferred share unit compensation 14,321 14,167 16,807
Deferred rent     (95)
Change in operating assets and liabilities:      
Accounts receivable 7,465 (5,799) 948
Unbilled receivable 990 (384) 1,963
Inventory     1,038
Contract asset 3,631 (3,131) (500)
Prepaid and other current assets (2,476) (963) (1,495)
Operating lease right-of-use assets 1,515 1,331  
Other assets (7,202) (75) 88
Accounts payable (819) (1,045) 2,667
Accrued compensation (4,100) (2,189) 323
Other accrued liabilities 16,734 (6,146) 3,839
Deferred revenue (17,323) 46,630 (9,165)
Operating lease liability (2,972) (2,505)  
Net cash used for operating activities (78,620) (88,367) (166,422)
Cash flows from investing activities:      
Purchases of property and equipment (917) (2,845) (5,246)
Proceeds from sale of equipment 1,426 2,312  
Net cash provided by (used for) investing activities 509 (533) (5,246)
Cash flows from financing activities:      
Proceeds from issuance of common stock under stock plans 1,471 2,873 4,301
Proceeds from common stock issuance, net of $701 and $395 of transaction costs, respectively 194,271   162,512
Net cash provided by financing activities 195,742 2,873 166,813
Net change in cash and cash equivalents 117,631 (86,027) (4,855)
Cash and cash equivalents, beginning of period 176,225 262,252 267,107
Cash and cash equivalents, end of period 293,856 176,225 262,252
Supplemental cash flow information:      
Cash paid during the year for interest $ 95 $ 95 $ 95