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Income Taxes - Expense (Details) - USD ($)
$ in Thousands
6 Months Ended 12 Months Ended
Dec. 31, 2016
Dec. 31, 2018
Dec. 31, 2017
Jun. 30, 2016
Reconciliation of the expected statutory tax benefit to the actual income taxes        
U.S. federal corporate tax rate (as a percent) 34.00% 21.00% 34.00% 34.00%
Loss before income tax expense $ (78,883) $ (168,843) $ (96,012) $ (144,817)
Expected tax benefit at 21%, 34%, 34% and 34%, respectively (26,820) (35,457) (32,644) (49,238)
Permanent differences 15 (103) 25 345
Incentive stock options 1,313 1,144 1,528 2,501
State tax benefit net of federal benefit (4,157) (10,622) (3,537) (7,954)
Change in valuation allowance, net 32,922 53,706 (63,238) 62,505
Federal research credit (1,232) (2,466) (2,204) (4,109)
Federal orphan drug credit (2,901) (6,934) (7,118) (4,241)
Expired loss and credit carryforwards       184
Change in U.S. tax law     97,479  
Debt inducement     8,044  
Lease incentive   109    
Stock option expirations 860 623 1,665 7
Benefit for income taxes