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CONSOLIDATED STATEMENTS OF CASH FLOWS (USD $)
In Thousands, unless otherwise specified
12 Months Ended
Jun. 30, 2014
Jun. 30, 2013
Jun. 30, 2012
Cash flows from operating activities:      
Net loss $ (71,364) $ (72,811) $ (73,319)
Adjustments to reconcile net loss to net cash used for operating activities:      
Depreciation and amortization 4,598 4,641 4,633
Loss (Gain) on sale/disposal of fixed assets 20 (21) 51
(Gain) Loss on forward contracts (2) (197) 173
Non-cash licensing fee 12,830    
Stock and deferred share unit compensation 16,080 12,751 10,252
Deferred rent 297 (109) (109)
Change in operating assets and liabilities:      
Accounts receivable (1,896) 129 4,539
Unbilled revenue 792 (925) 292
Inventory (2,247) 585 (808)
Prepaid and other current assets 571 (181) 253
Restricted cash 2,231 319 1,018
Other assets 4 (43) (16)
Accounts payable 321 1,103 182
Accrued compensation 712 1,211 219
Other accrued liabilities (394) 481 133
Deferred revenue, net of non-cash upfront license payment (16,675) (7,232) 18,219
Proceeds from landlord for tenant improvements 472    
Net cash used for operating activities (53,650) (60,299) (34,288)
Cash flows from investing activities:      
Purchases of property and equipment, net (8,184) (3,770) (2,908)
(Payments) proceeds from settlement of forward contracts (1) 74 (60)
Net cash used for investing activities (8,185) (3,696) (2,968)
Cash flows from financing activities:      
Proceeds from stock options exercised 9,136 4,026 6,988
Proceeds from common stock issuance, net   93,991  
Net cash provided by financing activities 9,136 98,017 6,988
Net change in cash and cash equivalents (52,699) 34,022 (30,268)
Cash and cash equivalents, beginning of period 194,960 160,938 191,206
Cash and cash equivalents, end of period $ 142,261 $ 194,960 $ 160,938