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Income Taxes (Tables)
12 Months Ended
Dec. 31, 2013
Income Taxes [Abstract]  
Schedule of deferred tax assets and liabilities
Deferred tax assets and liabilities as of December 31, 2013 and 2012, consisted of the following:

 
 
2013
  
2012
 
Deferred tax assets:
 
  
 
Depreciation and amortization
 
$
6,165
  
$
6,497
 
R&E tax credit carry-forwards
  
5,129
   
11,843
 
NYS investment tax credit carry-forwards
  
1,095
   
1,084
 
AMT credit carry-forwards
  
211
   
211
 
Net operating loss carry-forwards
  
190,263
   
112,966
 
Capitalized research and development expenditures
  
25,231
   
30,884
 
Stock compensation
  
13,826
   
14,436
 
Other items
  
1,097
   
2,193
 
Total gross deferred tax assets
  
243,017
   
180,114
 
Less: Valuation allowance
  
(243,017
)
  
(178,045
)
Deferred tax assets
  
-
   
2,069
 
Deferred tax liability - current
  
-
   
(2,069
)
Deferred tax liability – long term
  
(12,321
)
  
-
 
Net deferred tax liability
 
$
(12,321
)
 
$
-
 
 
Schedule of reconciliation of income taxes
The following is a reconciliation of income taxes computed at the Federal statutory income tax rate to the actual effective income tax provision during 2013, 2012 and 2011:

 
 
2013
  
2012
  
2011
 
 
 
  
  
 
U.S. Federal statutory rate
  
(34.0
)%
  
(35.0
)%
  
35.0
%
State income taxes, net of Federal benefit
  
(4.9
)
  
(5.4
)
  
8.0
 
Research and experimental tax credit
  
(3.6
)
  
-
   
(4.1
)
Change in valuation allowance
  
11.4
   
34.7
   
(22.6
)
Effect of federal tax rate bracket change on valuation allowance
  
8.7
   
-
   
(34.8
)
Equity compensation
  
3.1
   
4.2
   
17.0
 
Investment tax credit
  
(0.1
)
  
-
   
(0.1
)
NOL expiration – Section 382
  
18.6
   
-
   
-
 
Other
  
-
   
1.5
   
1.6
 
Income tax provision (benefit)
  
(0.8
)%
  
0.0
%
  
0.0
%
 
Schedule of Unrecognized Tax Benefits Roll Forward [Table Text Block]
As of December 31, 2013, we have not recognized any liability for uncertain tax positions, because of our full valuation allowance. We will recognize interest and penalties related to these positions, should such costs be assessed. As of December 31, 2013, we have not recognized interest and penalties. The recognition of unrecognized tax benefits would not affect our effective tax rate because the tax benefit would be offset by an increase in our valuation allowance.

The following is a tabular reconciliation of the total amounts of unrecognized tax benefits for the year ended December 31, 2013.

 
 
2013
 
 
Beginning uncertain tax benefits
 
$
2,661
Current year - increases
  
-
Current year - decreases
  
-
Settlements
  
-
Expired statuses
  
-
Ending uncertain tax benefits
 
$
2,661