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Stock-based Compensation (Tables)
9 Months Ended
Sep. 30, 2012
Stock-based Compensation [Abstract]  
Weighted average assumptions
The fair value of stock-based awards was estimated based on the following weighted average assumptions for the three and nine months ended September 30, 2012 and 2011:
 
   
Three Months Ended September 30,
  
Nine Months Ended September 30,
 
   
2012
  
2011
  
2012
  
2011
 
Dividend yield
  0%  0%  0%  0%
Expected volatility
  92%  89%  92%  87%
Risk-free interest rate
  0.65%  0.96%  0.83%  1.86%
Expected term
 
5.6 years
  
5.6 years
  
5.6 years
  
5.3 years
 
Stock option activity
Stock option activity for the nine months ended September 30, 2012 was as follows:
 
   
Options
  
Weighted Average
Exercise Price Per
Share
  
Weighted Average
Remaining
Contractual Life
(in years)
  
Aggregate
Intrinsic Value
(in thousands)
 
Options outstanding at December 31, 2011
  5,053,435  $12.55   6.89  $- 
Granted
  2,161,920   2.57         
Exercised
  (77,797)  1.69         
Forfeited, expired or cancelled
  (484,144)  15.96         
Options outstanding at September 30, 2012
  6,653,414  $9.19   7.51  $4,520,629 
Options exercisable at September 30, 2012
  4,003,868  $13.10   6.53  $2,106,931 
Unvested RSU activity
Unvested RSU activity for the nine months ended September 30, 2012 is summarized below:
 
     
Weighted-
 
  
Number of
  
Average Grant-
 
  
Shares
  
Date Fair Value
 
Unvested balance at December 31, 2011
  903,874  $1.69 
Granted
  1,190,323   2.84 
Vested
  (194,629)  3.44 
Forfeited
  (200,261)  1.69 
Unvested balance at September 30, 2012
  1,699,307  $2.29 
Stock-based compensation expense
The following table shows total stock-based compensation expense included in the condensed consolidated statements of comprehensive loss for the three and nine months ended September 30, 2012 and 2011 (in thousands):

   
Three Months Ended September 30,
  
Nine Months Ended September 30,
 
   
2012
  
2011
  
2012
  
2011
 
Research and development
 $1,304  $458  $1,984  $2,404 
Selling, general and administrative
  818   1,084   1,384   3,194 
Total stock-based compensation expense
 $2,122  $1,542  $3,368  $5,598