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Condensed Consolidated Statements of Cash Flows - USD ($)
$ in Thousands
9 Months Ended
Sep. 30, 2019
Sep. 30, 2018
Cash flow from operating activities    
Net loss $ (31,023) $ (65,757)
Adjustments to reconcile net loss to net cash provided by operating activities:    
Stock-based compensation expense 12,120 13,072
Depreciation 2,007 1,538
Amortization of premiums and discounts on marketable securities (2,927) (1,563)
In-kind research and development expenses 616 176
Other non-cash items (1,810) 497
Changes in operating assets and liabilities:    
Collaboration receivable (11,733)  
Unbilled accounts receivable (2,300)  
Prepaid expenses and other current assets 52 (127)
Operating lease, right-of-use asset 2,092  
Other non-current assets (413) (180)
Accounts payable 2,988 402
Accrued expenses 6,244 (3,306)
Operating lease liabilities (1,860)  
Lease incentive benefit   321
Deferred revenue 97,973 63,388
Net cash provided by operating activities 72,026 8,461
Cash flow from investing activities    
Purchases of property and equipment (4,342) (3,782)
Proceeds from sale of equipment 171  
Purchases of marketable securities (409,068) (274,381)
Proceeds from maturities of marketable securities 296,300 276,000
Net cash used in investing activities (116,939) (2,163)
Cash flow from financing activities    
Proceeds from the exercise of stock options 2,606 3,472
Proceeds from the issuance of common stock in connection with the Neurocrine Collaboration Agreement, net 77,617  
Proceeds from the purchase of common stock under ESPP 471 842
Net cash provided by financing activities 80,694 4,314
Net increase in cash, cash equivalents, and restricted cash 35,781 10,612
Cash, cash equivalents, and restricted cash beginning of period 47,594 32,265
Cash, cash equivalents, and restricted cash end of period 83,375 42,877
Supplemental disclosure of cash and non-cash activities    
Capital expenditures incurred but not yet paid $ 357  
ASU 2014-09    
Supplemental disclosure of cash and non-cash activities    
Impact of adopting new accounting standards   $ 20,050