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Income Taxes
12 Months Ended
Dec. 31, 2015
Income Tax Disclosure [Abstract]  
Income Taxes
Income Taxes
The following table summarizes the components of our income tax (benefit) expense (in thousands):
 
 
 
Year ended December 31,
 
 
2015
 
2014
 
2013
Current:
 
 
 
 
 
 
Federal
 
$
—

 
$
—

 
$
—

State
 
1

 
1

 
1

 
 
1

 
1

 
1

Deferred:
 
 
 
 
 
 
Federal
 
(17
)
 
—

 
(20
)
State
 
(2
)
 
—

 
(4
)
 
 
(19
)
 
—

 
(24
)
Income tax (benefit) expense
 
$
(18
)
 
$
1

 
$
(23
)

 
The following is a reconciliation of the expected statutory federal income tax provision to our actual income tax provision (in thousands):
 
 
Year ended December 31,
 
 
2015
 
2014
 
2013
Expected income tax benefit at federal statutory tax rate
 
$
(18,960
)
 
$
(19,271
)
 
$
(6,355
)
State income taxes, net of federal benefit
 
(1,580
)
 
(2,348
)
 
(1,090
)
Tax credits
 
(5,039
)
 
(3,307
)
 
(2,406
)
Change in fair value of convertible note payable
 
616

 
4,120

 
456

Change in valuation allowance
 
23,216

 
20,047

 
9,026

Prior year true-up
 
110

 
(92
)
 
(235
)
Stock compensation
 
1,161

 
902

 
667

Reserve for uncertain tax positions
 
254

 
—

 
—

Other
 
204

 
(50
)
 
(86
)
Income tax (benefit) expense
 
$
(18
)
 
$
1

 
$
(23
)








The following table summarizes the significant components of our deferred tax assets and liabilities (in thousands):
 
 
December 31,
 
 
2015
 
2014
Deferred tax assets:
 
 
 
 
Net operating loss carryovers
 
$
48,912

 
$
34,954

Research and development and other tax credits
 
15,148

 
8,732

Deferred revenue
 
1,210

 
1,919

Intangibles and property and equipment basis difference
 
2,097

 
1,874

Stock compensation expense
 
3,488

 
1,999

Other
 
1,129

 
617

Total deferred tax assets
 
71,984

 
50,095

Total deferred tax liabilities
 
(343
)
 
(1,670
)
Net deferred tax asset
 
71,641

 
48,425

Valuation allowance
 
(71,641
)
 
(48,425
)
Net deferred tax asset
 
$
—

 
$
—


For all periods presented, we have determined that it is more likely than not that our deferred tax asset will not be realized. Accordingly, we have recorded a valuation allowance to fully offset the net deferred tax asset of $71.6 million.
As of December 31, 2015, we had federal and California tax net operating loss carryforwards of $143.5 million and $133.3 million, respectively, which begin to expire in 2030 and 2031. At December 31, 2015, approximately $19.4 million and $14.5 million of the Federal and State net operating loss carryforwards, respectively, relate to stock option exercises, which will result in an increase to additional paid-in capital and a decrease in income taxes payable at the time when the tax loss carryforwards are utilized. As of December 31, 2015, we also had federal and California research and development tax credit carryforwards of $12.8 million and $5.4 million, respectively. The federal research and development tax credit carryforwards will begin to expire in 2029. The California research and development tax credit carryforwards are available indefinitely. As of December 31, 2015, we also had $0.2 million of Federal Alternative Minimum Tax Credit carryforwards that are available indefinitely.
 
The future utilization of our research and development credit carryforwards and net operating loss carryforwards to offset future taxable income may be subject to an annual limitation as a result of ownership changes that have occurred previously or may occur in the future. The Tax Reform Act of 1986 (the Act) limits a company’s ability to utilize certain tax credit carryforwards and net operating loss carryforwards in the event of a cumulative change in ownerships in excess of 50% as defined in the Act.
The following table summarizes the changes in the amount of our unrecognized tax benefits (in thousands):
 
 
Year Ended December 31,
 
 
2015
 
2014
 
2013
Beginning balance of unrecognized tax benefits
 
$
1,853

 
$
1,092

 
$
569

(Decrease) increase for prior year tax positions
 
(250
)
 
(73
)
 
137

Increase for current year tax positions
 
695

 
834

 
386

Total
 
$
2,298

 
$
1,853

 
$
1,092


Included in unrecognized tax benefits of $2.3 million at December 31, 2015 was $1.7 million of tax benefits that, if recognized, would reduce our annual effective tax rate, subject to valuation allowance.
We are subject to taxation in the United States and California. Our tax years for 2009 and forward are subject to examination by the U.S. tax authorities and our tax years for 2009 and forward are subject to examination by the California tax authorities due to carryforward of unutilized net operating losses and research and development credits.
It is our practice to recognize interest and/or penalties related to income tax matters in income tax expense. For the years ended December 31, 2015, 2014 and 2013, we have not recognized any interest or penalties related to income taxes.