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Condensed Consolidated Statements of Cash Flows (Unaudited) - USD ($)
$ in Thousands
6 Months Ended
Jun. 30, 2017
Jun. 30, 2016
Operating activities    
Net loss $ (90,711) $ (46,301)
Adjustments to reconcile net loss to net cash used in operating activities:    
Depreciation and amortization expense 8,841 7,236
Stock-based compensation expense 13,125 7,670
Amortization of premiums and discounts on marketable securities 18 148
Gain on disposal of long-lived assets (139)  
Changes in operating assets and liabilities:    
Accounts receivable (5,439) (3,056)
Receivable from Roche (2,076) (1,627)
Inventory 1,655 (2,168)
Prepaid expenses and other current assets 195 2,688
Other assets (778) 18
Accounts payable 4,431 4,797
Accrued expenses and other current liabilities 4,184 2,323
Deferred rent and other non-current liabilities (126) (991)
Deferred revenue (178) 467
Roche related-party deferred revenue (5)  
Net cash used in operating activities (67,003) (28,796)
Investing activities    
Purchases of property and equipment (6,705) (11,996)
Purchases of marketable securities and other investments (4,996) (77,445)
Proceeds from maturities of marketable securities 49,390 62,453
Net cash provided by (used in) investing activities 37,689 (26,988)
Financing activities    
Proceeds from stock option exercises 2,188 303
Net cash provided by financing activities 2,188 303
Net decrease in cash and cash equivalents (27,126) (55,481)
Effect of exchange rate changes on cash and cash equivalents 41  
Cash and cash equivalents at beginning of period 63,617 117,763
Cash and cash equivalents at end of period 36,532 62,282
Supplemental disclosure of non-cash investing and financing activities    
Cash paid for interest 150  
Acquisition of property and equipment included in accounts payable and accrued expenses $ 1,247 $ 1,941