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Income Taxes (Tables)
12 Months Ended
Dec. 31, 2016
Income Tax Disclosure [Abstract]  
Schedule of reconciliation of the statutory U.S. federal rate to the Company's effective tax rate
A reconciliation of the statutory U.S. federal rate to the Company's effective tax rate is as follows:
 
Years ended December 31,
 
2016
 
2015
 
2014
Percent of pre-tax income:
 

 
 

 
 

U.S. federal statutory income tax rate
35.0
 %
 
35.0
 %
 
35.0
 %
State taxes, net of federal benefit
2.8
 %
 
7.4
 %
 
6.8
 %
Permanent items
(1.4
)%
 
(0.5
)%
 
2.3
 %
Impact of state rate changes
(11.0
)%
 
0.9
 %
 
 %
Research and development credit
1.9
 %
 
 %
 
 %
Other
1.1
 %
 
 %
 
 %
Change in valuation allowance
(28.2
)%
 
(29.1
)%
 
(89.5
)%
Effective income tax rate
0.2
 %
 
13.7
 %
 
(45.4
)%
Schedule of components of income tax (benefit) expense
The components of income tax (benefit) expense are as follows:
 
Years ended December 31,
 
2016
 
2015
 
2014
Current:
 

 
 

 
 

Federal
$
(23,393
)
 
$
136

 
$
29,505

State
21

 
91

 
11,440

Deferred:
 

 
 

 
 

Federal
22,966

 
(17,014
)
 
(4,469
)
State

 

 

Income tax (benefit) expense
$
(406
)
 
$
(16,787
)
 
$
36,476

Schedule of significant components of the Company's deferred tax assets (liabilities)
Significant components of the Company's deferred tax assets (liabilities) for 2016 and 2015 consist of the following:
 
As of December 31,
 
2016
 
2015
Deferred tax assets (liabilities)
 

 
 

Deferred revenue
$
125,634

 
$
142,675

License and technology payments
10,532

 
13,150

Share-based compensation
16,494

 
11,427

Accrued expenses
530

 
743

Depreciation
(651
)
 
(617
)
Federal and state net operating loss carryforwards
75,177

 
26,065

Excess tax benefits related to share-based compensation

 
1,630

Research and development credits
3,720

 

Other
2,155

 
5

Deferred income tax assets
233,591

 
195,078

Valuation allowance
(233,591
)
 
(171,965
)
Net deferred tax assets
$

 
$
23,113

Schedule of position with respect to uncertain tax positions
The Company's position with respect to uncertain tax positions is set forth below:

Opening balance
$
300

Gross amount of increases in unrecognized tax benefits during the period - current year provisions

Gross amount of increases in unrecognized tax benefits during the period - prior year provisions
3,828

Gross amount of increases in unrecognized tax benefits during the period - other

Decreases due to settlement with tax authorities during the period

Reduction of unrecognized tax benefits due to expiration of the state of limitations during the period

Closing Balance
$
4,128