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Consolidated Statements of Cash Flows (USD $)
In Thousands, unless otherwise specified
12 Months Ended
Dec. 31, 2013
Dec. 31, 2012
Dec. 31, 2011
Cash flows from operating activities      
Net (loss) income $ (92,273) $ (46,284) $ 53,815
Income from discontinued operations     (77,040)
Loss from continuing operations (92,273) (46,284) (23,225)
Adjustments to reconcile (loss) income from continuing operations to net cash used in operating activities:      
Loss on extinguishment of debt 9,550    
Gain on sale of property and equipment     (25)
Change in fair value of derivative liability 13,354 710 85
Unrealized gain (loss) on marketable securities 57 (57) 1
Depreciation and amortization 742 871 879
Income tax benefit 0 0 (16,245)
Amortization of deferred financing costs and debt discount 3,033 330 218
Share-based compensation expense 1,913 443 (82)
Changes in operating assets and liabilities :      
Accounts receivable (5,043) (11) 44
Interest receivable 181 (664) 114
Inventory (6,000) (1,152)  
Prepaid expenses and other assets (1,070) (516) (247)
Accounts payable and accrued expenses 8,492 (1,098) (959)
Deferred product revenue, net 7,883    
Deferred licensing revenue 803 120 697
Other non-current liabilities 429 109 539
Net cash used in operating activities from continuing operations (57,949) (47,199) (38,206)
Net cash provided by operating activities from discontinued operations     2,021
Net cash used in operating activities (57,949) (47,199) (36,185)
Cash flows from investing activities      
Purchases of marketable securities (85,567) (97,674) (17,890)
Sales and maturities of marketable securities 75,806 49,468 26,870
Purchases of property and equipment, net (1,646) (753) (685)
Capitalized patent defense costs (705)    
Net cash (used in) provided by investing activities from continuing operations (12,112) (48,959) 8,295
Net cash provided by disposal/sale of discontinued operations     25,607
Net cash (used in) provided by investing activities (12,112) (48,959) 33,902
Cash flows from financing activities      
Proceeds from issuance of common stock 2,437 100,735 29
Proceeds from issuance of secured notes payable     30,000
Proceeds from convertible debt issuance 90,000    
Repayment of secured notes payable (24,344) (6,775)  
Cash settlement of debt to equity conversion (1,727)    
Financing costs and underwriters discounts (3,627) (6,044) (975)
Net cash provided by financing activities from continuing operations 62,739 87,916 29,054
Net cash used in financing activities from discontinued operations     (1,967)
Net cash provided by financing activities 62,739 87,916 27,087
Net change in cash and cash equivalents (7,322) (8,242) 24,804
Cash and cash equivalents at beginning of year 40,302 48,544 23,740
Cash and cash equivalents at end of year 32,980 40,302 48,544
Supplemental cash flow information:      
Cash paid for interest- Continuing operations 4,313 2,938 1,412
Noncash financial activity:      
Conversion of convertible notes 42,417    
Conversion of preferred stock   49  
Issuance of warrants     612
Exercise of warrants   $ 1,156