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Consolidated Statements of Comprehensive Loss - USD ($)
$ in Thousands
12 Months Ended
Dec. 31, 2017
Dec. 31, 2016
Dec. 31, 2015
Statement of Comprehensive Income [Abstract]      
Net loss $ (126,820) $ (190,274) $ (87,994)
Other comprehensive income (loss):      
Unrealized gain (loss) on investments 87 430 (561)
Gain (loss) on foreign currency translation adjustments 20,599 (23,901) (12,108)
Comprehensive loss (106,134) (213,745) (100,663)
Comprehensive loss attributable to the noncontrolling interests 9,764 3,683 3,422
Comprehensive loss attributable to Intrexon $ (96,370) $ (210,062) $ (97,241)