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Consolidated Statements of Comprehensive Loss - USD ($)
$ in Thousands
12 Months Ended
Dec. 31, 2016
Dec. 31, 2015
Dec. 31, 2014
Statement of Comprehensive Income [Abstract]      
Net loss $ (190,274) $ (87,994) $ (85,616)
Other comprehensive income (loss):      
Unrealized gain (loss) on investments 430 (561) 21
Loss on foreign currency translation adjustments (23,901) (12,108) (33)
Comprehensive loss (213,745) (100,663) (85,628)
Comprehensive loss attributable to the noncontrolling interests 3,683 3,422 3,750
Comprehensive loss attributable to Intrexon $ (210,062) $ (97,241) $ (81,878)