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Income Taxes
12 Months Ended
Dec. 31, 2016
Income Tax Disclosure [Abstract]  
Income Taxes
Income Taxes
The components of loss before income taxes are presented below:
 
Year Ended December 31,
 
2016
 
2015
 
2014
Domestic
$
(157,067
)
 
$
(69,287
)
 
$
(83,256
)
Foreign
(37,084
)
 
(17,691
)
 
(2,463
)
Loss before income taxes
$
(194,151
)
 
$
(86,978
)
 
$
(85,719
)

The components of income tax expense (benefit) are presented below:
 
Year Ended December 31,
 
2016
 
2015
 
2014
U.S. federal income taxes:
 
 
 
 
 
Current
$
(17
)
 
$
22

 
$

Deferred
1,396

 
1,732

 

Foreign income taxes:
 
 
 
 
 
Current
(393
)
 
(123
)
 
(103
)
Deferred
(5,177
)
 
(1,003
)
 

State income taxes:
 
 
 
 
 
Deferred
314

 
388

 

Income tax expense (benefit)
$
(3,877
)
 
$
1,016

 
$
(103
)

Income tax expense (benefit) for the years ended December 31, 2016, 2015 and 2014 differed from amounts computed by applying the applicable U.S. federal corporate income tax rate of 34% to loss before income taxes as a result of the following:
 
2016
 
2015
 
2014
Computed statutory income tax benefit
$
(66,011
)
 
$
(29,573
)
 
$
(29,144
)
State and provincial income tax benefit, net of federal income taxes
(7,905
)
 
(3,157
)
 
(3,544
)
Nondeductible stock based compensation
3,321

 
3,182

 
1,386

Nondeductible officer compensation

 
2,433

 

Contribution of services by shareholder

 

 
677

Research and development tax incentives
(6,350
)
 
(348
)
 
258

Acquisition and internal restructuring transaction costs
571

 
883

 

Enacted change in tax rates

 
(961
)
 

U.S.-foreign rate differential
3,463

 
620

 

Other, net
1,485

 
(98
)
 
1,503

 
(71,426
)
 
(27,019
)
 
(28,864
)
Change in valuation allowance for deferred tax assets
67,549

 
28,035

 
28,761

Total income tax expense (benefit)
$
(3,877
)
 
$
1,016

 
$
(103
)

The tax effects of temporary differences that comprise the deferred tax assets and liabilities as of December 31, 2016 and 2015, are as follows:
 
2016
 
2015
Deferred tax assets
 
 
 
Allowance for doubtful accounts
$
1,676

 
$
1,056

Inventory
447

 
967

Equity securities and investments in affiliates
31,729

 
10,413

Accrued liabilities and long-term debt
4,168

 
4,585

Stock-based compensation
8,460

 
7,223

Deferred revenue
68,056

 
31,637

Research and development tax credits
10,396

 
9,113

Net operating and capital loss carryforwards
144,502

 
135,633

Total deferred tax assets
269,434

 
200,627

Less: Valuation allowance
256,165

 
190,174

Net deferred tax assets
13,269

 
10,453

Deferred tax liabilities
 
 
 
Property, plant and equipment
406

 
160

Intangible assets
29,870

 
32,095

Total deferred tax liabilities
30,276

 
32,255

Net deferred tax liabilities
$
(17,007
)
 
$
(21,802
)

Activity within the valuation allowance for deferred tax assets during the years ended December 31, 2016, 2015 and 2014 was as follows:
 
2016
 
2015
 
2014
Valuation allowance at beginning of year
$
190,174

 
$
161,660

 
$
131,985

Increase (decrease) in valuation allowance as a result of
 
 
 
 
 
Mergers and acquisitions, net
(1,416
)
 
1,228

 
914

Current year operations
67,549

 
28,035

 
28,761

Foreign currency translation adjustment
(142
)
 
(749
)
 

Valuation allowance at end of year
$
256,165

 
$
190,174

 
$
161,660


In assessing the realizability of deferred tax assets, management considers whether it is more likely than not that some portion or all of the deferred tax assets will not be realized. The ultimate realization of deferred tax assets is dependent upon the generation of future taxable income during the periods in which those temporary differences become deductible. Management considers the scheduled reversal of deferred tax liabilities, projected future taxable income and tax planning strategies in making this assessment. Due to the Company and its subsidiaries' histories of net losses incurred from inception, any corresponding net domestic and certain foreign deferred tax assets have been fully reserved as the Company and its subsidiaries cannot sufficiently be assured that these deferred tax assets will be realized. The components of the deferred tax assets and liabilities as of the date of the mergers and acquisitions by the Company prior to consideration of the valuation allowance are substantially similar to the components of deferred tax assets presented herein.
The Company's past issuances of stock and mergers and acquisitions have resulted in ownership changes as defined in Section 382 of the Internal Revenue Code of 1986, as amended ("Section 382"). As a result, utilization of portions of the net operating losses may be subject to annual limitations. As of December 31, 2016, approximately $15,100 of the Company's domestic net operating losses generated prior to 2008 are limited by Section 382 to annual usage limits of approximately $1,500. As of December 31, 2016, approximately $18,600 of the Company's domestic net operating losses were inherited via acquisition and are limited based on the value of the target at the time of the transaction.
As of December 31, 2016, the Company has loss carryforwards for U.S. federal income tax purposes of approximately $252,971 available to offset future taxable income and federal and state research and development tax credits of $7,514, prior to consideration of annual limitations that may be imposed under Section 382. These carryforwards will begin to expire in 2022. Of these loss carryforwards, $44,929 relate to benefits from stock compensation deductions that will be recorded as a component of paid-in capital when realized. The Company's direct foreign subsidiaries have foreign loss carryforwards of approximately $119,155, most of which do not expire.
The Company does not record deferred taxes on the undistributed earnings of its direct foreign subsidiaries because it does not expect the temporary differences related to those unremitted earnings to reverse in the foreseeable future. As of December 31, 2016, the Company's direct foreign subsidiaries had accumulated deficits of approximately $27,885. Future distributions of accumulated earnings of the Company's direct foreign subsidiaries may be subject to U.S. income and foreign withholding taxes.
The Company does not file a consolidated income tax return with AquaBounty or BioPop. As of December 31, 2016, AquaBounty has loss carryforwards for federal and foreign income tax purposes of approximately $22,215 and $12,925, respectively, and foreign tax credits of approximately $2,428 available to offset future taxable income, prior to consideration of annual limitations that may be imposed under Section 382 or analogous foreign provisions. These carryforwards will begin to expire in 2018. As a result of the Company's ownership in AquaBounty passing 50% in 2013, an annual Section 382 of approximately $900 per year will apply to domestic losses and credits carried forward by AquaBounty from prior years, which are also subject to prior Section 382 limitations. As of December 31, 2016, BioPop had loss carryforwards of approximately $1,402 for federal income tax purposes available to offset future taxable income.
The Company and its subsidiaries do not have material unrecognized tax benefits as of December 31, 2016. The Company does not anticipate significant changes in the amount of unrecognized tax benefits in the next 12 months. The Company's tax returns for years 2004 and forward are subject to examination by federal or state tax authorities due to the carryforward of unutilized net operating losses and research and development tax credits.