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Share-Based Payments - Additional Information (Details) - USD ($)
$ / shares in Units, $ in Thousands
1 Months Ended 3 Months Ended 12 Months Ended
Apr. 30, 2016
Mar. 31, 2016
Dec. 31, 2015
Aug. 31, 2013
Chief Executive Officer        
Share-based Compensation Arrangement by Share-based Payment Award [Line Items]        
Monthly compensation, in the form of equity   $ 200    
Lock-up period   3 years    
Initial term of compensation arrangement   12 months    
Chief Executive Officer | Selling, general and administrative        
Share-based Compensation Arrangement by Share-based Payment Award [Line Items]        
Fair value of shares issued   $ 471    
Intrexon Stock Option Plan - 2008 Plan        
Share-based Compensation Arrangement by Share-based Payment Award [Line Items]        
Remaining shares available to grant       0
Options outstanding (in shares)   1,154,315    
Intrexon Stock Option Plan - 2013 Plan        
Share-based Compensation Arrangement by Share-based Payment Award [Line Items]        
Remaining shares available to grant   2,421,499    
Options outstanding (in shares)   9,355,773    
Number of shares authorized for issuance   13,000,000    
Intrexon Stock Option Plan - 2013 Plan | Subsequent Event        
Share-based Compensation Arrangement by Share-based Payment Award [Line Items]        
Additional shares to be authorized, approved by Board of Directors, subject to shareholder approval 3,000,000      
Intrexon Stock Option Plans        
Share-based Compensation Arrangement by Share-based Payment Award [Line Items]        
Options outstanding (in shares)   10,510,088 11,043,528  
Unrecognized compensation costs related to nonvested awards   $ 103,746 $ 113,655  
Recognized over weighted-average period   3 years 3 years  
Weighted average exercise price of option (in usd per share)   $ 32.84 $ 32.66  
Shares exercisable at end of period   3,147,589    
AquaBounty Stock Option Plan        
Share-based Compensation Arrangement by Share-based Payment Award [Line Items]        
Options outstanding (in shares)   5,607,000 5,382,000  
Weighted average exercise price of option (in usd per share)   $ 0.26 $ 0.26  
Shares exercisable at end of period   5,090,791 4,320,333