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Income Taxes (Tables)
12 Months Ended
Oct. 03, 2020
Income Tax Disclosure [Abstract]  
Schedule of income (loss) before provision for (benefit from) income taxes
The Company’s income (loss) before provision for income taxes for fiscal 2020, 2019 and 2018 were as follows: 
 October 3,
2020
September 28,
2019
September 29,
2018
(In thousands)
Domestic$(15,194)$(858)$2,803 
Foreign(4,889)(218)(17,351)
Loss before provision for income taxes$(20,083)$(1,076)$(14,548)
Schedule of provision for (benefit from) income taxes
Components of the provision for income taxes consisted of the following:
 
 October 3,
2020
September 28,
2019
September 29,
2018
(In thousands)
Current:
U.S. Federal$(1,388)$1,366 $— 
U.S. State724 1,132 177 
Foreign1,220 1,463 816 
Total current556 3,961 993 
Deferred:
U.S. Federal— — (168)
U.S. State— — — 
Foreign(524)(271)231 
Total deferred(524)(271)63 
Provision for (benefit from) income taxes$32 $3,690 $1,056 
Schedule of deferred tax assets and liabilities
Components of the Company’s deferred income tax assets and liabilities are as follows: 
 October 3,
2020
September 28,
2019
(In thousands)
Deferred tax assets
Accrued expenses and reserves$12,014 $12,582 
Deferred revenue11,831 11,185 
U.S. net operating loss carryforwards8,242 15,112 
Foreign net operating loss carryforwards12,183 3,414 
Tax credit carryforwards53,543 43,411 
Stock-based compensation11,018 10,368 
Right-of-Use Liability14,377 — 
Amortization7,648 4,131 
Depreciation1,101 672 
Other603 453 
Total deferred tax assets132,560 101,328 
Valuation allowance(113,939)(95,088)
Deferred tax assets, net of valuation allowance18,621 6,240 
Deferred tax liabilities
Tax accounting method change(2,946)(5,086)
Right-of-Use Asset(9,914)— 
Amortization(6,093)— 
Depreciation(187)— 
Other(115)— 
Total deferred tax liabilities(19,255)(5,086)
Net deferred tax assets (liabilities)$(634)$1,154 
Reported as
Deferred tax assets$1,800 $1,154 
Deferred tax liabilities(2,434)— 
Net deferred tax assets (liabilities)$(634)$1,154 
Summary of changes in valuation allowance
The following table summarizes changes in the valuation allowance for fiscal 2020, 2019 and 2018:
(In thousands)October 3,
2020
September 28,
2019
September 29,
2018
Beginning balance$95,088 $72,380 $94,956 
Increase (decrease) during the period18,851 22,708 (22,576)
Ending balance$113,939 $95,088 $72,380 
Schedule of effective income tax rate reconciliation
Reconciliation of U.S. statutory federal income taxes to the Company’s provision for (benefit from) income taxes is as follows:
 
(In thousands)October 3,
2020
September 28,
2019
September 29,
2018
U.S. federal income taxes at statutory rate$(4,217)$(226)$(3,570)
U.S. state and local income taxes(2,798)(9,315)(1,441)
Foreign income tax rate differential(75)129 (53)
Stock-based compensation869 (2,399)4,025 
Federal research tax credits(8,012)(8,418)(4,333)
Unrecognized federal tax benefits815 (2,806)1,990 
Change in tax rate— 1,161 25,725 
Net Impact of GILTI— 239 — 
BEAT(781)781 — 
Other598 822 259 
Change in valuation allowance13,633 23,722 (21,546)
Provision for income taxes$32 $3,690 $1,056 
Schedule of changes in unrecognized tax benefits
Change in unrecognized tax benefits as a result of uncertain tax positions are as follows:
October 3,
2020
September 28,
2019
September 29,
2018
(In thousands)
Beginning balance$12,527 $17,794 $13,780 
Increase (decrease) - tax positions in prior periods(768)(8,226)$636 
Increase (decrease) - tax positions in current periods2,962 2,959 $3,378 
Ending balance$14,721 $12,527 $17,794