<?xml version="1.0"?>
<ownershipDocument>

    <schemaVersion>X0303</schemaVersion>

    <documentType>4/A</documentType>

    <periodOfReport>2009-08-06</periodOfReport>

    <dateOfOriginalSubmission>2009-08-10</dateOfOriginalSubmission>

    <issuer>
        <issuerCik>0001301063</issuerCik>
        <issuerName>Alpha Natural Resources, Inc.</issuerName>
        <issuerTradingSymbol>ANR</issuerTradingSymbol>
    </issuer>

    <reportingOwner>
        <reportingOwnerId>
            <rptOwnerCik>0001305735</rptOwnerCik>
            <rptOwnerName>Roberts James F</rptOwnerName>
        </reportingOwnerId>
        <reportingOwnerAddress>
            <rptOwnerStreet1>ONE ALPHA PLACE</rptOwnerStreet1>
            <rptOwnerStreet2>P. O. BOX 2345</rptOwnerStreet2>
            <rptOwnerCity>ABINGDON</rptOwnerCity>
            <rptOwnerState>VA</rptOwnerState>
            <rptOwnerZipCode>24212</rptOwnerZipCode>
            <rptOwnerStateDescription></rptOwnerStateDescription>
        </reportingOwnerAddress>
        <reportingOwnerRelationship>
            <isDirector>1</isDirector>
        </reportingOwnerRelationship>
    </reportingOwner>

    <nonDerivativeTable>
        <nonDerivativeTransaction>
            <securityTitle>
                <value>Common Stock</value>
            </securityTitle>
            <transactionDate>
                <value>2009-08-06</value>
            </transactionDate>
            <transactionCoding>
                <transactionFormType>4</transactionFormType>
                <transactionCode>M</transactionCode>
                <equitySwapInvolved>0</equitySwapInvolved>
            </transactionCoding>
            <transactionAmounts>
                <transactionShares>
                    <value>50000</value>
                    <footnoteId id="F1"/>
                </transactionShares>
                <transactionPricePerShare>
                    <value>7.87</value>
                    <footnoteId id="F2"/>
                </transactionPricePerShare>
                <transactionAcquiredDisposedCode>
                    <value>A</value>
                </transactionAcquiredDisposedCode>
            </transactionAmounts>
            <postTransactionAmounts>
                <sharesOwnedFollowingTransaction>
                    <value>180197</value>
                    <footnoteId id="F3"/>
                </sharesOwnedFollowingTransaction>
            </postTransactionAmounts>
            <ownershipNature>
                <directOrIndirectOwnership>
                    <value>D</value>
                </directOrIndirectOwnership>
            </ownershipNature>
        </nonDerivativeTransaction>
    </nonDerivativeTable>

    <derivativeTable>
        <derivativeTransaction>
            <securityTitle>
                <value>Non-Qualified Stock Option (right to buy)</value>
            </securityTitle>
            <conversionOrExercisePrice>
                <value>7.87</value>
                <footnoteId id="F2"/>
            </conversionOrExercisePrice>
            <transactionDate>
                <value>2009-08-06</value>
            </transactionDate>
            <transactionCoding>
                <transactionFormType>4</transactionFormType>
                <transactionCode>M</transactionCode>
                <equitySwapInvolved>0</equitySwapInvolved>
            </transactionCoding>
            <transactionAmounts>
                <transactionShares>
                    <value>50000</value>
                    <footnoteId id="F1"/>
                </transactionShares>
                <transactionPricePerShare>
                    <value>0</value>
                </transactionPricePerShare>
                <transactionAcquiredDisposedCode>
                    <value>D</value>
                </transactionAcquiredDisposedCode>
            </transactionAmounts>
            <exerciseDate>
                <footnoteId id="F4"/>
            </exerciseDate>
            <expirationDate>
                <value>2014-08-10</value>
            </expirationDate>
            <underlyingSecurity>
                <underlyingSecurityTitle>
                    <value>Common Stock</value>
                </underlyingSecurityTitle>
                <underlyingSecurityShares>
                    <value>50000</value>
                </underlyingSecurityShares>
            </underlyingSecurity>
            <postTransactionAmounts>
                <sharesOwnedFollowingTransaction>
                    <value>289156</value>
                </sharesOwnedFollowingTransaction>
            </postTransactionAmounts>
            <ownershipNature>
                <directOrIndirectOwnership>
                    <value>D</value>
                </directOrIndirectOwnership>
            </ownershipNature>
        </derivativeTransaction>
    </derivativeTable>

    <footnotes>
        <footnote id="F1">The exercise of 339,156 options with an conversion price of $7.87 per share was reported erroneously in this Form 4 filed on August 10, 2009.  The correct number of options exercised is 50,000.</footnote>
        <footnote id="F2">Price reflects adjustment for 1.084 exchange ratio pursuant to the Agreement and Plan of Merger between Alpha Natural Resources, Inc. and Foundation Coal Holdings, Inc. dated May 11, 2009 (renamed Alpha Natural Resources, Inc.).</footnote>
        <footnote id="F3">Balance reflects adjustment for 1.084 exchange ratio pursuant to the Agreement and Plan of Merger between Alpha Natural Resources, Inc. and Foundation Coal Holdings, Inc. dated May 11, 2009 (renamed Alpha Natural Resources, Inc.).</footnote>
        <footnote id="F4">The 782,189 shares of common stock originally subject to this option were set to vest on August 10, 2012.  Upon the achievement of certain annual performance targets, the options were subject to partial accelerated vesting.  The Compensation Committee approved the vesting of 10 percent of the options effective December 31, 2004, 30 percent effective December 31, 2005, 15 percent  effective December 31, 2006, 20 percent effective December 31, 2007, 5 percent effective February 11, 2008, 15 percent effective February 20, 2009, and 5 percent effective July 31, 2009.</footnote>
    </footnotes>

    <remarks></remarks>

    <ownerSignature>
        <signatureName>Edythe C. Katz, Attorney-in-Fact</signatureName>
        <signatureDate>2009-08-17</signatureDate>
    </ownerSignature>
</ownershipDocument>
