<?xml version="1.0"?>
<ownershipDocument>
    <schemaVersion>X0201</schemaVersion>

    <documentType>4/A</documentType><periodOfReport>2003-08-31</periodOfReport><dateOfOriginalSubmission>2003-09-12</dateOfOriginalSubmission>
    <issuer>
        <issuerCik>0000706539</issuerCik>
        <issuerName>CHIRON CORP</issuerName>
        <issuerTradingSymbol>CHIR</issuerTradingSymbol></issuer><reportingOwner>
        <reportingOwnerId>
            <rptOwnerCik>0001233539</rptOwnerCik>
            <rptOwnerName>PATTERSON LEONE D</rptOwnerName>
        </reportingOwnerId>
        <reportingOwnerAddress>
            <rptOwnerStreet1>4560 HORTON STREET</rptOwnerStreet1>
            <rptOwnerStreet2></rptOwnerStreet2>
            <rptOwnerCity>EMERYVILLE</rptOwnerCity>
            <rptOwnerState>CA</rptOwnerState>
            <rptOwnerZipCode>94608</rptOwnerZipCode>
            <rptOwnerStateDescription></rptOwnerStateDescription>
        </reportingOwnerAddress>
            <reportingOwnerRelationship>
<isDirector>0</isDirector><isOfficer>1</isOfficer><isTenPercentOwner>0</isTenPercentOwner><isOther>0</isOther><officerTitle>Controller</officerTitle></reportingOwnerRelationship></reportingOwner><nonDerivativeTable><nonDerivativeTransaction><securityTitle><value>Common Stock</value></securityTitle><transactionDate><value>2003-08-31</value></transactionDate><transactionCoding><transactionFormType>4</transactionFormType><transactionCode>F</transactionCode><equitySwapInvolved>0</equitySwapInvolved></transactionCoding><transactionAmounts><transactionShares><value>180</value></transactionShares><transactionPricePerShare><value>50.54</value></transactionPricePerShare><transactionAcquiredDisposedCode><value>D</value></transactionAcquiredDisposedCode></transactionAmounts><postTransactionAmounts><sharesOwnedFollowingTransaction><value>4541</value><footnoteId id="F1"/><footnoteId id="F2"/></sharesOwnedFollowingTransaction></postTransactionAmounts><ownershipNature><directOrIndirectOwnership><value>D</value></directOrIndirectOwnership><natureOfOwnership><value/></natureOfOwnership></ownershipNature></nonDerivativeTransaction></nonDerivativeTable><footnotes><footnote id="F1">This total includes 1,400 share rights awarded pursuant to the Chiron 1991 Stock Option Plan in transaction exempt under Rule 16b-3, which share rights are subject to certain vesting.</footnote><footnote id="F2">The amount of securities beneficially owned includes Reporting Person's purchase of 167 shares under Issuer's Employee Stock Purchase Plan, which purchase was not reportable under Section 16(a) of the Securities Exchange Act of 1934, as amended.</footnote></footnotes><remarks/><ownerSignature><signatureName>Leone D. Patterson by Carolyn Mar-Andreotti as Atty-in-Fact</signatureName><signatureDate>2003-09-12</signatureDate></ownerSignature></ownershipDocument>

