2.4.0.8 HtmlAndXml 194 204 1 true 65 0 false 16 false false R1.htm 0001000 - Document - Document and Entity Information Sheet http://www.codexis.com/role/DocumentAndEntityInformation Document and Entity Information R1.xml true false R2.htm 1001000 - Statement - Condensed Consolidated Balance Sheets Sheet http://www.codexis.com/role/CondensedConsolidatedBalanceSheets Condensed Consolidated Balance Sheets R2.xml false false R3.htm 1001501 - Statement - Condensed Consolidated Balance Sheets (Parenthetical) Sheet http://www.codexis.com/role/CondensedConsolidatedBalanceSheetsParenthetical Condensed Consolidated Balance Sheets (Parenthetical) R3.xml false false R4.htm 1002000 - Statement - Condensed Consolidated Statements of Operations Sheet http://www.codexis.com/role/CondensedConsolidatedStatementsOfOperations Condensed Consolidated Statements of Operations R4.xml false false R5.htm 1003000 - Statement - Condensed Consolidated Statements of Comprehensive Loss Sheet http://www.codexis.com/role/CondensedConsolidatedStatementsOfComprehensiveLoss Condensed Consolidated Statements of Comprehensive Loss R5.xml false false R6.htm 1003001 - Statement - Condensed Consolidated Statements of Comprehensive Loss (Parenthetical) Sheet http://www.codexis.com/role/CondensedConsolidatedStatementsOfComprehensiveLossParenthetical Condensed Consolidated Statements of Comprehensive Loss (Parenthetical) R6.xml false false R7.htm 1004000 - Statement - Condensed Consolidated Statements of Cash Flows Sheet http://www.codexis.com/role/CondensedConsolidatedStatementsOfCashFlows Condensed Consolidated Statements of Cash Flows R7.xml false false R8.htm 2101100 - Disclosure - Description of Business Sheet http://www.codexis.com/role/DescriptionOfBusiness Description of Business R8.xml false false R9.htm 2102100 - Disclosure - Basis of Presentation and Summary of Significant Accounting Policies Sheet http://www.codexis.com/role/BasisOfPresentationAndSummaryOfSignificantAccountingPolicies Basis of Presentation and Summary of Significant Accounting Policies R9.xml false false R10.htm 2103100 - Disclosure - Collaborative Research and Development Agreements Sheet http://www.codexis.com/role/CollaborativeResearchAndDevelopmentAgreements Collaborative Research and Development Agreements R10.xml false false R11.htm 2105100 - Disclosure - Balance Sheets Details Sheet http://www.codexis.com/role/BalanceSheetsDetails Balance Sheets Details R11.xml false false R12.htm 2106100 - Disclosure - Cash Equivalents and Marketable Securities Sheet http://www.codexis.com/role/CashEquivalentsAndMarketableSecurities Cash Equivalents and Marketable Securities R12.xml false false R13.htm 2107100 - Disclosure - Fair Value Measurements Sheet http://www.codexis.com/role/FairValueMeasurements Fair Value Measurements R13.xml false false R14.htm 2108100 - Disclosure - Related Party Transactions Sheet http://www.codexis.com/role/RelatedPartyTransactions Related Party Transactions R14.xml false false R15.htm 2109100 - Disclosure - Commitments and Contingencies Sheet http://www.codexis.com/role/CommitmentsAndContingencies Commitments and Contingencies R15.xml false false R16.htm 2110100 - Disclosure - Warrants Sheet http://www.codexis.com/role/Warrants Warrants R16.xml false false R17.htm 2111100 - Disclosure - Stock-Based Compensation Sheet http://www.codexis.com/role/StockBasedCompensation Stock-Based Compensation R17.xml false false R18.htm 2112100 - Disclosure - Segment Reporting Sheet http://www.codexis.com/role/SegmentReporting Segment Reporting R18.xml false false R19.htm 2113100 - Disclosure - Restructuring Sheet http://www.codexis.com/role/Restructuring Restructuring R19.xml false false R20.htm 2114100 - Disclosure - Subsequent Event Sheet http://www.codexis.com/role/SubsequentEvent Subsequent Event R20.xml false false R21.htm 2202201 - Disclosure - Basis of Presentation and Summary of Significant Accounting Policies (Policies) Sheet http://www.codexis.com/role/BasisOfPresentationAndSummaryOfSignificantAccountingPoliciesPolicies Basis of Presentation and Summary of Significant Accounting Policies (Policies) R21.xml false false R22.htm 2302302 - Disclosure - Basis of Presentation and Summary of Significant Accounting Policies (Tables) Sheet http://www.codexis.com/role/BasisOfPresentationAndSummaryOfSignificantAccountingPoliciesTables Basis of Presentation and Summary of Significant Accounting Policies (Tables) R22.xml false false R23.htm 2305301 - Disclosure - Balance Sheets Details (Tables) Sheet http://www.codexis.com/role/BalanceSheetsDetailsTables Balance Sheets Details (Tables) R23.xml false false R24.htm 2306301 - Disclosure - Cash Equivalents and Marketable Securities (Tables) Sheet http://www.codexis.com/role/CashEquivalentsAndMarketableSecuritiesTables Cash Equivalents and Marketable Securities (Tables) R24.xml false false R25.htm 2307301 - Disclosure - Fair Value Measurements (Tables) Sheet http://www.codexis.com/role/FairValueMeasurementsTables Fair Value Measurements (Tables) R25.xml false false R26.htm 2309301 - Disclosure - Commitments and Contingencies (Tables) Sheet http://www.codexis.com/role/CommitmentsAndContingenciesTables Commitments and Contingencies (Tables) R26.xml false false R27.htm 2310301 - Disclosure - Warrants (Tables) Sheet http://www.codexis.com/role/WarrantsTables Warrants (Tables) R27.xml false false R28.htm 2311301 - Disclosure - Stock-Based Compensation (Tables) Sheet http://www.codexis.com/role/StockBasedCompensationTables Stock-Based Compensation (Tables) R28.xml false false R29.htm 2312301 - Disclosure - Segment Reporting (Tables) Sheet http://www.codexis.com/role/SegmentReportingTables Segment Reporting (Tables) R29.xml false false R30.htm 2313301 - Disclosure - Restructuring (Tables) Sheet http://www.codexis.com/role/RestructuringTables Restructuring (Tables) R30.xml false false R31.htm 2401401 - Disclosure - Description of Business (Details) Sheet http://www.codexis.com/role/DescriptionOfBusinessDetails Description of Business (Details) R31.xml false false R32.htm 2402403 - Disclosure - Basis of Presentation and Summary of Significant Accounting Policies (Textual) (Details) Sheet http://www.codexis.com/role/BasisOfPresentationAndSummaryOfSignificantAccountingPoliciesTextualDetails Basis of Presentation and Summary of Significant Accounting Policies (Textual) (Details) R32.xml false false R33.htm 2402404 - Disclosure - Basis of Presentation and Summary of Significant Accounting Policies (Anti-Dilutive Securities) (Details) Sheet http://www.codexis.com/role/BasisOfPresentationAndSummaryOfSignificantAccountingPoliciesAntiDilutiveSecuritiesDetails Basis of Presentation and Summary of Significant Accounting Policies (Anti-Dilutive Securities) (Details) R33.xml false false R34.htm 2403401 - Disclosure - Collaborative Research and Development Agreements (Details) Sheet http://www.codexis.com/role/CollaborativeResearchAndDevelopmentAgreementsDetails Collaborative Research and Development Agreements (Details) R34.xml false false R35.htm 2405402 - Disclosure - Balance Sheets Details (Inventory) (Details) Sheet http://www.codexis.com/role/BalanceSheetsDetailsInventoryDetails Balance Sheets Details (Inventory) (Details) R35.xml false false R36.htm 2405403 - Disclosure - Balance Sheets Details (Property and Equipment) (Details) Sheet http://www.codexis.com/role/BalanceSheetsDetailsPropertyAndEquipmentDetails Balance Sheets Details (Property and Equipment) (Details) R36.xml false false R37.htm 2405404 - Disclosure - Balance Sheets Details (Accumulated Other Comprehensive Income (Loss)) (Details) Sheet http://www.codexis.com/role/BalanceSheetsDetailsAccumulatedOtherComprehensiveIncomeLossDetails Balance Sheets Details (Accumulated Other Comprehensive Income (Loss)) (Details) R37.xml false false R38.htm 2406402 - Disclosure - Cash Equivalents and Marketable Securities (Components of Cash Equivalents and Marketable Securities) (Details) Sheet http://www.codexis.com/role/CashEquivalentsAndMarketableSecuritiesComponentsOfCashEquivalentsAndMarketableSecuritiesDetails Cash Equivalents and Marketable Securities (Components of Cash Equivalents and Marketable Securities) (Details) R38.xml false false R39.htm 2406403 - Disclosure - Cash Equivalents and Marketable Securities (Textual) (Details) Sheet http://www.codexis.com/role/CashEquivalentsAndMarketableSecuritiesTextualDetails Cash Equivalents and Marketable Securities (Textual) (Details) R39.xml false false R40.htm 2407402 - Disclosure - Fair Value Measurements (Schedule of Financial Instruments Measured at Fair Value on Recurring Basis) (Details) Sheet http://www.codexis.com/role/FairValueMeasurementsScheduleOfFinancialInstrumentsMeasuredAtFairValueOnRecurringBasisDetails Fair Value Measurements (Schedule of Financial Instruments Measured at Fair Value on Recurring Basis) (Details) R40.xml false false R41.htm 2407403 - Disclosure - Fair Value Measurements (Textual) (Details) Sheet http://www.codexis.com/role/FairValueMeasurementsTextualDetails Fair Value Measurements (Textual) (Details) R41.xml false false R42.htm 2408401 - Disclosure - Related Party Transactions (Details) Sheet http://www.codexis.com/role/RelatedPartyTransactionsDetails Related Party Transactions (Details) R42.xml false false R43.htm 2409402 - Disclosure - Commitments and Contingencies (Textual) (Details) Sheet http://www.codexis.com/role/CommitmentsAndContingenciesTextualDetails Commitments and Contingencies (Textual) (Details) R43.xml false false R44.htm 2409403 - Disclosure - Commitments and Contingencies (Future Minimum Lease Payments) (Details) Sheet http://www.codexis.com/role/CommitmentsAndContingenciesFutureMinimumLeasePaymentsDetails Commitments and Contingencies (Future Minimum Lease Payments) (Details) R44.xml false false R45.htm 2410402 - Disclosure - Warrants (Details) Sheet http://www.codexis.com/role/WarrantsDetails Warrants (Details) R45.xml false false R46.htm 2411402 - Disclosure - Stock-Based Compensation (Textual) (Details) Sheet http://www.codexis.com/role/StockBasedCompensationTextualDetails Stock-Based Compensation (Textual) (Details) R46.xml false false R47.htm 2411403 - Disclosure - Stock-Based Compensation (Shares Available For Grant) (Details) Sheet http://www.codexis.com/role/StockBasedCompensationSharesAvailableForGrantDetails Stock-Based Compensation (Shares Available For Grant) (Details) R47.xml false false R48.htm 2411404 - Disclosure - Stock-Based Compensation (Stock-Based Compensation Expense) (Details) Sheet http://www.codexis.com/role/StockBasedCompensationStockBasedCompensationExpenseDetails Stock-Based Compensation (Stock-Based Compensation Expense) (Details) R48.xml false false R49.htm 2412402 - Disclosure - (Revenues by Geographic Area) (Details) Sheet http://www.codexis.com/role/RevenuesByGeographicAreaDetails (Revenues by Geographic Area) (Details) R49.xml false false R50.htm 2412403 - Disclosure - (Long-Lived Assets by Geographic Area) (Details) Sheet http://www.codexis.com/role/LongLivedAssetsByGeographicAreaDetails (Long-Lived Assets by Geographic Area) (Details) R50.xml false false R51.htm 2413402 - Disclosure - Restructuring (Changes in Restructuring Accrual) (Details) Sheet http://www.codexis.com/role/RestructuringChangesInRestructuringAccrualDetails Restructuring (Changes in Restructuring Accrual) (Details) R51.xml false false R52.htm 2413403 - Disclosure - Restructuring (Textual) (Details) Sheet http://www.codexis.com/role/RestructuringTextualDetails Restructuring (Textual) (Details) R52.xml false false R53.htm 2414401 - Disclosure - Subsequent Event (Details) Sheet http://www.codexis.com/role/SubsequentEventDetails Subsequent Event (Details) R53.xml false false All Reports Book All Reports Element cdxs_LeaseAreaSpaceOccupancy had a mix of decimals attribute values: -3 0. Element cdxs_ShellCollaborativeResearchAndDevelopmentRevenue had a mix of decimals attribute values: -5 0. Element us-gaap_AvailableForSaleSecuritiesGrossUnrealizedLosses1 had a mix of decimals attribute values: -3 0. Element us-gaap_ResearchAndDevelopmentArrangementContractToPerformForOthersCompensationEarned had a mix of decimals attribute values: -5 -3. Element us-gaap_RestructuringReserveSettledWithCash had a mix of decimals attribute values: -5 -3. 'Monetary' elements on report '2402403 - Disclosure - Basis of Presentation and Summary of Significant Accounting Policies (Textual) (Details)' had a mix of different decimal attribute values. 'Monetary' elements on report '2403401 - Disclosure - Collaborative Research and Development Agreements (Details)' had a mix of different decimal attribute values. 'Monetary' elements on report '2406402 - Disclosure - Cash Equivalents and Marketable Securities (Components of Cash Equivalents and Marketable Securities) (Details)' had a mix of different decimal attribute values. 'Monetary' elements on report '2406403 - Disclosure - Cash Equivalents and Marketable Securities (Textual) (Details)' had a mix of different decimal attribute values. 'Monetary' elements on report '2408401 - Disclosure - Related Party Transactions (Details)' had a mix of different decimal attribute values. 'Monetary' elements on report '2409402 - Disclosure - Commitments and Contingencies (Textual) (Details)' had a mix of different decimal attribute values. 'Monetary' elements on report '2413403 - Disclosure - Restructuring (Textual) (Details)' had a mix of different decimal attribute values. Process Flow-Through: 1001000 - Statement - Condensed Consolidated Balance Sheets Process Flow-Through: Removing column 'Jun. 30, 2012' Process Flow-Through: Removing column 'Dec. 31, 2011' Process Flow-Through: 1001501 - Statement - Condensed Consolidated Balance Sheets (Parenthetical) Process Flow-Through: 1002000 - Statement - Condensed Consolidated Statements of Operations Process Flow-Through: Removing column '3 Months Ended Sep. 30, 2012' Process Flow-Through: 1003000 - Statement - Condensed Consolidated Statements of Comprehensive Loss Process Flow-Through: 1003001 - Statement - Condensed Consolidated Statements of Comprehensive Loss (Parenthetical) Process Flow-Through: 1004000 - Statement - Condensed Consolidated Statements of Cash Flows cdxs-20130630.xml cdxs-20130630.xsd cdxs-20130630_cal.xml cdxs-20130630_def.xml cdxs-20130630_lab.xml cdxs-20130630_pre.xml true true