X0303 4 2009-12-28 0 0000844059 PATRIOT TRANSPORTATION HOLDING INC PATR 0001190089 BAKER JOHN D II 501 RIVERSIDE AVENUE SUITE 500 JACKSONVILLE FL 32202 1 0 0 0 Common Stock 2009-12-28 4 G 0 29546 0 D 73451 I See footnote. Common Stock 1000 D Common Stock 1963 I See footnote. Common Stock 1061521 I See footnote. Common Stock 1549 I See footnote. Common Stock 22238 I See footnote. Common Stock 28880 I See footnote. Common Stock 10000 I See footnote. Common Stock 6642 I See footnote. Common Stock 28879 I See footnote. Shares held by John D. Baker II Living Trust for which the reporting person serves as trustee. The reporting person made gifts of a total of 29,546 to various charitable organizations and family members. Shares held by wife's living trust. Baker Holdings, L.P. directly owns 1,061,521 shares. The reporting persons shares voting and dispositive power over all the shares held by Baker Holdings, L.P. and has a pecuniary interest in 353,840 shares. the reporting person disclaims beneficial interest in the shares held by Baker Holdings, L.P., except to the extent of his pecuniary interest therein. Shares held as beneficiary of the issuer's Employee Benefit Plan (401(k) Profit Sharing Plan). Shares held by Edward L. Baker II Irrevocable Trust. The trust is administered by the reporting peson's brother as trustee and is for the benefit of the reporting person's son, Edward L. Baker II. The reporting person disclaims beneficial interest in these shares. Shares held by John D. Baker II Irrevocable Trust. the trust is administered by the reporting person's brother as trustee and is for the benefit of the reporting person's son, John D. Baker II. The reporting person disclaims beneficial interest in these shares. Shares held by John D. Baker II Irrevocable Trust #1. The trust is administered by an independent trustee and is for the benefit of the reporting person's spouse and children. The reporting person disclaims any beneficial interest in these shares. Shares held by John D. Baker II Irrevocable Trust #2. The trust is administered by the reporting person's brother as trustee and is for the benefit of the reporting person's son, Edward L. Baker II. The reporting person disclaims beneficial interest in these shares. Shares held by Susan Anne Baker Irrevocable Trust. The trust is administered by the reporting person's brother as trustee and is for the benefit of the reporting person's daughter, Susan Anne Baker. The reporting person disclaims beneficial interest in these shares. /s/ Daniel B. Nunn, Jr., attorney in fact for John D. Baker II 2010-01-05