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Income Taxes - Tax Credits and Benefits (Details) - USD ($)
$ in Thousands
12 Months Ended
Jun. 30, 2016
Jun. 30, 2015
Jun. 30, 2014
Valuation allowance      
Valuation allowance percentage established for domestic and foreign net deferred tax assets 100.00%    
Aggregate changes in the balance of gross unrecognized tax benefits      
Balance at beginning of year $ 17,023 $ 17,169 $ 16,749
Tax positions related to current year: Additions 1,811 726 1,489
Tax positions related to prior years: Additions 449 29  
Tax positions related to prior years: Reductions (2,640) (901) (1,069)
Balance at end of year 16,643 17,023 $ 17,169
Reduction in uncertain tax position due to lapse of various statutes of limitation $ 1,600    
Subsequent period within which no material changes in unrecognized tax benefits are expected 12 months    
Uncertain tax benefits that, if realized, would affect the effective tax rate $ 11,200    
Accrued interest and penalties related to uncertain tax positions 500 $ 900  
Federal | Research and development      
Income Tax Contingency [Line Items]      
Tax credits 17,900    
State | Research and development      
Income Tax Contingency [Line Items]      
Tax credits $ 17,600