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Consolidated Statements of Cash Flows - USD ($)
$ in Thousands
12 Months Ended
Dec. 31, 2019
Dec. 31, 2018
Dec. 31, 2017
Cash flows from operating activities:      
Net loss $ (111,560) $ (162,044) $ (120,692)
Adjustments to reconcile net loss to net cash used in operating activities:      
Depreciation and amortization 6,662 6,288 6,006
Share-based compensation 9,892 7,625 12,429
Non-cash royalty revenue (30,424) (17,309)  
Non-cash interest expense 42,201 24,599 18,242
Loss on disposal of assets 58 145 24
Change in fair value of contingent obligations 5,805 (1,335) (3,188)
Gain on issuance of stock for settlement of milestone obligation     (566)
Loss on extinguishment of debt   10,767  
Changes in operating assets and liabilities:      
Accounts receivable (15,355) 196 10,217
Inventories 55 24 9
Prepaid expenses 11,792 (8,210) (8,453)
Accounts payable (234) 5,366 1,646
Deferred revenue 53,900 (397) (2,722)
Accrued liabilities and other current liabilities 7,097 3,303 (4,849)
Other operating assets and liabilities 1,429 (113) (2,329)
Net cash used in operating activities (18,682) (131,095) (94,226)
Cash flows from investing activities:      
Proceeds from sale of plant and equipment   6 120
Purchases of plant and equipment (4,657) (3,597) (3,120)
Purchases of available-for-sale securities     (14,936)
Proceeds from sale of available-for-sale securities     20,000
Net cash provided by (used in) investing activities (4,657) (3,591) 2,064
Cash flows from financing activities:      
Net proceeds from sale of equity 30,000 44,919 65,560
Proceeds from employee stock purchases and option exercises 1,643 1,234 987
Purchase of treasury shares to satisfy tax withholdings     (527)
Proceeds from issuance of long-term debt     15,000
Debt issuance costs     (150)
Proceeds from sale of future royalties   204,878  
Transaction costs from sale of future royalties and milestones   (494)  
Repayments of debt   (161,847)  
Payment of finance lease obligation (320) (283) (331)
Net cash provided by (used in) financing activities 31,323 128,286 80,539
Effect of exchange rate changes on cash 770 (733) 362
Net decrease in cash and cash equivalents 8,754 (7,133) (11,261)
Cash and cash equivalents, beginning of period 53,054 60,187 71,448
Cash and cash equivalents, end of period 61,808 53,054 60,187
Supplemental cash flow information:      
Cash paid for interest 1,224 1,171 1,120
Supplemental disclosures - non-cash activities:      
Purchases of plant and equipment in accounts payable and accrued liabilities 1,242 300 968
Lease right-of-use assets obtained in exchange for new operating lease liabilities 3,017    
Milestone obligation [Member]      
Supplemental disclosures - non-cash activities:      
Issuance of common stock     1,486
Payment to Consultant [Member]      
Supplemental disclosures - non-cash activities:      
Issuance of common stock $ 81 50  
SECANT Yeast Display technology [Member]      
Supplemental disclosures - non-cash activities:      
Issuance of common stock     $ 3,548
Series C-1 Convertible Preferred Stock [Member]      
Cash flows from financing activities:      
Net proceeds from sale of C-1 Preferred Stock   $ 39,879