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Income Taxes (Tables)
12 Months Ended
Jun. 30, 2013
Income Tax Disclosure [Abstract]  
Components of Income Before Income Taxes and Income Tax Expense (Benefit)
The components of income (loss) before income taxes and income tax expense (benefit) were as follows:
 
Year Ended June 30,
 
2013
 
2012
 
2011
(Loss) income before income taxes:
 
 
 
 
 
United States
$
(23,639
)
 
$
31,277

 
$
26,007

Foreign
477

 
494

 
495

 
$
(23,162
)
 
$
31,771

 
$
26,502

Tax (benefit) provision:
 
 
 
 
 
Federal:
 
 
 
 
 
Current
$
(427
)
 
$
10,591

 
$
4,974

Deferred
(9,376
)
 
(2,582
)
 
1,992

 
$
(9,803
)
 
$
8,009

 
$
6,966

State:
 
 
 
 
 
Current
$
192

 
$
1,401

 
$
855

Deferred
(707
)
 
(335
)
 
48

 
$
(515
)
 
$
1,066

 
$
903

Foreign:
 
 
 
 
 
Current
$
364

 
$
77

 
$
161

Deferred

 

 
30

 
$
364

 
$
77

 
$
191

 
$
(9,954
)
 
$
9,152

 
$
8,060

Reconciliation Between Statutory Federal Income Tax Rate and Effective Income Tax Rate from Continuing Operations
The following is the reconciliation between the statutory federal income tax rate and the Company’s effective income tax (benefit) rate:
 
Year Ended June 30,
 
2013
 
2012
 
2011
Tax (benefit) provision at federal statutory rates
(35.0
)%
 
35.0
 %
 
35.0
 %
State income tax, net of federal tax benefit
(1.8
)
 
2.6

 
2.2

Research and development credits
(13.2
)
 
(4.2
)
 
(6.9
)
Domestic manufacturing deduction

 
(3.0
)
 
(2.6
)
Equity compensation
1.8

 
1.0

 
1.6

Change in the fair value of the liability related to the LNX earn-out

 
(5.4
)
 

Acquisition costs
0.5

 
1.3

 
0.6

Valuation allowance
2.6

 
2.2

 
1.7

Other
2.0

 
(0.7
)
 
(1.3
)
 
(43.1
)%
 
28.8
 %
 
30.3
 %
Components of Net Deferred Tax Assets (Liabilities)
The components of the Company’s net deferred tax assets (liabilities) were as follows:
 
June 30,
 
2013
 
2012
Deferred tax assets:
 
 
 
Inventory valuation and receivable allowances
$
8,805

 
$
4,788

Accrued compensation
1,197

 
1,367

Equity compensation
6,290

 
6,036

Federal and state research and development tax credit carryforwards
9,746

 
8,569

Gain on sale-leaseback
1,676

 
2,116

Other accruals
1,087

 
919

Other temporary differences
3,038

 
1,333

 
31,839

 
25,128

Valuation allowance
(9,032
)
 
(8,682
)
Total deferred tax assets
22,807

 
16,446

Deferred tax liabilities:
 
 
 
Deferred revenue
(1,745
)
 
(3,488
)
Property and equipment
(3,122
)
 
(3,995
)
Acquired intangible assets
(12,342
)
 
(8,507
)
Other temporary differences
(1,647
)
 

Total deferred tax liabilities
(18,856
)
 
(15,990
)
Net deferred tax assets
$
3,951

 
$
456

Summary of Reserves for Unrecognized Income Tax Benefits
The changes in the Company’s reserves for unrecognized income tax benefits are summarized as follows:
 
 
Year Ended June 30,
 
2013
 
2012
Unrecognized tax benefits, beginning of period
$
2,642

 
$
1,831

Increases for previously recognized positions
140

 
716

Settlements of previously recognized positions

 

Decreases for previously recognized positions

 
(84
)
Increases for currently recognized positions
141

 
179

Unrecognized tax benefits, end of period
$
2,923

 
$
2,642