10-Q

UNITED STATES
SECURITIES AND EXCHANGE COMMISSION
Washington, D.C. 20549

Form 10-Q

(Mark One)
ý	QUARTERLY REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE SECURITIES EXCHANGE ACT OF 1934
For the quarterly period ended September 30, 2013
OR
o	TRANSITION REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE SECURITIES EXCHANGE ACT OF 1934
For the transition period from            to

Commission file number: 1-13011

COMFORT SYSTEMS USA, INC.
(Exact name of registrant as specified in its charter)

DELAWARE (State or other jurisdiction of Incorporation or Organization)	76-0526487 (I.R.S. Employer Identification No.)
675 Bering Drive Suite 400 Houston, Texas 77057 (Address of Principal Executive Offices) (Zip Code)

Registrant's telephone number, including area code: (713) 830-9600

        Indicate by check mark whether the registrant (1) has filed all reports required to be filed by Section 13 or 15(d) of the Securities Exchange Act of 1934 during the preceding 12 months (or for such shorter period that the registrant was required to file such reports), and (2) has been subject to such filing requirements for the past 90 days. Yes ý    No o

        Indicate by check mark whether the registrant has submitted electronically and posted on its corporate Web site, if any, every Interactive Data File required to be submitted and posted pursuant to Rule 405 of Regulation S-T (Section 232.405 of this chapter) during the preceding 12 months (or for such shorter period that the registrant was required to submit and post such files). Yes ý    No o

        Indicate by check mark whether the Registrant is a large accelerated filer, an accelerated filer, a non-accelerated filer, or a smaller reporting company (as defined in Rule 12b-2 of the Exchange Act).

Large accelerated filer o Accelerated filer ý Non-accelerated filer o
(Do not check if a
smaller reporting company) Smaller reporting company o

        Indicate by check mark whether the registrant is a shell company (as defined in Exchange Act Rule 12b-2). Yes o    No ý

        The number of shares outstanding of the issuer's common stock as of October 23, 2013 was 37,355,508 (excluding treasury shares of 3,767,857).

COMFORT SYSTEMS USA, INC.
INDEX TO FORM 10-Q
FOR THE QUARTER ENDED SEPTEMBER 30, 2013

	Page
Part I—Financial Information
Item 1—Financial Statements
Consolidated Balance Sheets		1
Consolidated Statements of Operations		2
Consolidated Statements of Stockholders' Equity		3
Consolidated Statements of Cash Flows		4
Condensed Notes to Consolidated Financial Statements		5
Item 2—Management's Discussion and Analysis of Financial Condition and Results of Operations		15
Item 3—Quantitative and Qualitative Disclosures about Market Risk		32
Item 4—Controls and Procedures		32
Part II—Other Information
Item 1—Legal Proceedings		33
Item 1A—Risk Factors		33
Item 2—Unregistered Sales of Equity Securities and Use of Proceeds		33
Item 6—Exhibits		35
Signatures		36

COMFORT SYSTEMS USA, INC.

CONSOLIDATED BALANCE SHEETS

(In Thousands, Except Share Amounts)

	September 30, 2013			December 31, 2012
	(Unaudited)
ASSETS
CURRENT ASSETS:
Cash and cash equivalents	$	45,305		$	40,757
Accounts receivable, less allowance for doubtful accounts of $4,398 and $6,333, respectively		270,612			256,959
Other receivables		7,947			12,376
Inventories		9,336			9,638
Prepaid expenses and other		25,529			25,037
Costs and estimated earnings in excess of billings		30,200			26,204
Assets related to discontinued operations		297			1,582
Total current assets		389,226			372,553
PROPERTY AND EQUIPMENT, NET		44,943			41,416
GOODWILL		114,588			114,588
IDENTIFIABLE INTANGIBLE ASSETS, NET		39,107			44,515
OTHER NONCURRENT ASSETS		6,590			7,682
Total assets	$	594,454		$	580,754
LIABILITIES AND STOCKHOLDERS' EQUITY
CURRENT LIABILITIES:
Current maturities of long-term debt	$	—		$	300
Current maturities of notes to former owners		2,000			—
Accounts payable		95,667			100,641
Accrued compensation and benefits		44,185			36,892
Billings in excess of costs and estimated earnings		62,566			73,814
Accrued self-insurance expense		29,930			29,096
Other current liabilities		32,213			27,077
Liabilities related to discontinued operations		88			767
Total current liabilities		266,649			268,587
LONG-TERM DEBT, NET OF CURRENT MATURITIES		5,000			2,100
NOTES TO FORMER OWNERS, NET OF CURRENT MATURITIES		—			5,000
DEFERRED INCOME TAX LIABILITIES		8,596			7,954
OTHER LONG-TERM LIABILITIES		7,996			9,807
Total liabilities		288,241			293,448
COMMITMENTS AND CONTINGENCIES
STOCKHOLDERS' EQUITY:
Preferred stock, $.01 par, 5,000,000 shares authorized, none issued and outstanding		—			—
Common stock, $.01 par, 102,969,912 shares authorized, 41,123,365 and 41,123,365 shares issued, respectively		411			411
Treasury stock, at cost, 3,767,857 and 3,879,299 shares, respectively		(40,461	)		(41,012	)
Additional paid-in capital		317,184			317,534
Retained earnings (deficit)		11,230			(6,528	)
Comfort Systems USA, Inc. stockholders' equity		288,364			270,405
Noncontrolling interests		17,849			16,901
Total stockholders' equity		306,213			287,306
Total liabilities and stockholders' equity	$	594,454		$	580,754

The accompanying notes are an integral part of these consolidated financial statements.

1

COMFORT SYSTEMS USA, INC.

CONSOLIDATED STATEMENTS OF OPERATIONS

(In Thousands, Except Per Share Data)

(Unaudited)

	Three Months Ended September 30,						Nine Months Ended September 30,
	2013			2012			2013			2012
REVENUE	$	349,989		$	335,241		$	1,026,932		$	1,015,315
COST OF SERVICES		282,968			279,720			848,477			862,767
Gross profit		67,021			55,521			178,455			152,548
SELLING, GENERAL AND ADMINISTRATIVE EXPENSES		49,404			45,853			141,623			138,781
GAIN ON SALE OF ASSETS		(117	)		(99	)		(367	)		(438	)
Operating income		17,734			9,767			37,199			14,205
OTHER INCOME (EXPENSE):
Interest income		5			13			19			21
Interest expense		(347	)		(406	)		(1,032	)		(1,231	)
Changes in the fair value of contingent earn-out obligations		750			(38	)		696			(105	)
Other		83			13			184			82
Other income (expense)		491			(418	)		(133	)		(1,233	)
INCOME BEFORE INCOME TAXES		18,225			9,349			37,066			12,972
INCOME TAX EXPENSE		6,588			3,926			14,366			6,031
INCOME FROM CONTINUING OPERATIONS		11,637			5,423			22,700			6,941
Loss from discontinued operations, net of income tax expense (benefit) of $(18), $77, $(57) and $37		(25	)		(98	)		(79	)		(237	)
NET INCOME INCLUDING NONCONTROLLING INTERESTS		11,612			5,325			22,621			6,704
Less: Net income (loss) attributable to noncontrolling interests		233			(348	)		948			(2,408	)
NET INCOME ATTRIBUTABLE TO COMFORT SYSTEMS USA, INC.	$	11,379		$	5,673		$	21,673		$	9,112
INCOME (LOSS) PER SHARE ATTRIBUTABLE TO COMFORT SYSTEMS USA, INC.:
Basic—
Income from continuing operations	$	0.31		$	0.15		$	0.58		$	0.25
Loss from discontinued operations		—			—			—			—
Net income	$	0.31		$	0.15		$	0.58		$	0.25
Diluted—
Income from continuing operations	$	0.30		$	0.15		$	0.58		$	0.25
Loss from discontinued operations		—			—			—			(0.01	)
Net income	$	0.30		$	0.15		$	0.58		$	0.24
SHARES USED IN COMPUTING INCOME (LOSS) PER SHARE:
Basic		37,293			37,155			37,184			37,126
Diluted		37,631			37,332			37,444			37,265
DIVIDENDS PER SHARE	$	0.055		$	0.05		$	0.155		$	0.15

The accompanying notes are an integral part of these consolidated financial statements.

2

COMFORT SYSTEMS USA, INC.

CONSOLIDATED STATEMENTS OF STOCKHOLDERS' EQUITY

(In Thousands, Except Share Amounts)

	Common Stock				Treasury Stock
											Additional Paid-In Capital			Retained Earnings (Deficit)			Non- Controlling Interests			Total Stockholders' Equity
	Shares		Amount		Shares			Amount
BALANCE AT DECEMBER 31, 2011		41,123,365	$	411		(3,714,506	)	$	(39,437	)	$	323,608		$	(19,991	)	$	18,515		$	283,106
Net income (loss)		—		—		—			—			—			13,463			(1,614	)		11,849
Issuance of Stock:
Issuance of shares for options exercised including tax benefit		—		—		102,750			1,087			(714	)		—			—			373
Issuance of restricted stock		—		—		70,000			742			(742	)		—			—			—
Shares received in lieu of tax withholding payment on vested restricted stock		—		—		(51,507	)		(544	)		—			—			—			(544	)
Tax benefit from vesting of restricted stock		—		—		—			—			56			—			—			56
Stock-based compensation		—		—		—			—			2,797			—			—			2,797
Dividends		—		—		—			—			(7,471	)		—			—			(7,471	)
Share repurchase		—		—		(286,036	)		(2,860	)		—			—			—			(2,860	)
BALANCE AT DECEMBER 31, 2012		41,123,365		411		(3,879,299	)		(41,012	)		317,534			(6,528	)		16,901			287,306
Net income (unaudited)		—		—		—			—			—			21,673			948			22,621
Issuance of Stock:
Issuance of shares for options exercised including tax benefit (unaudited)		—		—		159,461			1,701			(29	)		—			—			1,672
Issuance of restricted stock (unaudited)		—		—		122,375			1,301			(1,301	)		—			—			—
Shares received in lieu of tax withholding payment on vested restricted stock (unaudited)		—		—		(44,384	)		(614	)		—			—			—			(614	)
Tax benefit from vesting of restricted stock (unaudited)		—		—		—			—			172			—			—			172
Forfeiture of unvested restricted stock (unaudited)		—		—		(469	)		(5	)		5			—			—			—
Stock-based compensation (unaudited)		—		—		—			—			2,665			—			—			2,665
Dividends (unaudited)		—		—		—			—			(1,862	)		(3,915	)		—			(5,777	)
Share repurchase (unaudited)		—		—		(125,541	)		(1,832	)		—			—			—			(1,832	)
BALANCE AT SEPTEMBER 30, 2013 (unaudited)		41,123,365	$	411		(3,767,857	)	$	(40,461	)	$	317,184		$	11,230		$	17,849		$	306,213

The accompanying notes are an integral part of these consolidated financial statements.

3

COMFORT SYSTEMS USA, INC.

CONSOLIDATED STATEMENTS OF CASH FLOWS

(In Thousands)

(Unaudited)

	Three Months Ended September 30,						Nine Months Ended September 30,
	2013			2012			2013			2012
CASH FLOWS FROM OPERATING ACTIVITIES
Net income including noncontrolling interests	$	11,612		$	5,325		$	22,621		$	6,704
Adjustments to reconcile net income to net cash provided by (used in) operating activities—
Amortization of identifiable intangible assets		1,739			2,411			5,408			6,557
Depreciation expense		2,866			2,921			8,511			8,924
Bad debt expense		(60	)		(18	)		(378	)		2,468
Deferred tax expense (benefit)		692			641			1,168			(204	)
Amortization of debt financing costs		65			57			180			172
Gain on sale of assets		(117	)		(99	)		(367	)		(554	)
Changes in the fair value of contingent earn-out obligations		(750	)		38			(696	)		105
Stock-based compensation expense		523			462			3,243			2,106
Changes in operating assets and liabilities, net of effects of acquisitions—
(Increase) decrease in—
Receivables, net		23,944			16,019			(6,976	)		(3,887	)
Inventories		315			557			302			925
Prepaid expenses and other current assets		(122	)		158			(11	)		737
Costs and estimated earnings in excess of billings		(886	)		558			(3,996	)		(2,681	)
Other noncurrent assets		(186	)		(593	)		63			(2,535	)
Increase (decrease) in—
Accounts payable and accrued liabilities		671			(9,178	)		5,413			(14,878	)
Billings in excess of costs and estimated earnings		(13,517	)		(2,888	)		(11,248	)		(1,240	)
Other long-term liabilities		644			84			545			713
Net cash provided by operating activities		27,433			16,455			23,782			3,432
CASH FLOWS FROM INVESTING ACTIVITIES:
Purchases of property and equipment		(5,234	)		(2,817	)		(12,471	)		(9,405	)
Proceeds from sales of property and equipment		64			205			566			967
Proceeds from businesses sold		—			43			43			121
Cash paid for acquisitions, earn-outs and intangible assets, net of cash acquired		—			(428	)		—			(12,656	)
Net cash used in investing activities		(5,170	)		(2,997	)		(11,862	)		(20,973	)
CASH FLOWS FROM FINANCING ACTIVITIES:
Net borrowings (payments) on revolving line of credit		5,000			(4,000	)		5,000			14,000
Payments on other long-term debt		(3,400	)		(300	)		(5,400	)		(4,400	)
Debt financing costs		—			—			(552	)		—
Payments of dividends to shareholders		(2,052	)		(1,859	)		(5,818	)		(5,641	)
Share repurchase program		(1,177	)		(512	)		(1,832	)		(1,424	)
Shares received in lieu of tax withholding		8			8			(614	)		(535	)
Excess tax benefit of stock-based compensation		(17	)		25			226			(101	)
Proceeds from exercise of options		1,334			34			1,618			70
Net cash provided by (used in) financing activities		(304	)		(6,604	)		(7,372	)		1,969
NET INCREASE (DECREASE) IN CASH AND CASH EQUIVALENTS		21,959			6,854			4,548			(15,572	)
CASH AND CASH EQUIVALENTS, beginning of period		23,346			28,811			40,757			51,237
CASH AND CASH EQUIVALENTS, end of period	$	45,305		$	35,665		$	45,305		$	35,665

The accompanying notes are an integral part of these consolidated financial statements.

4

COMFORT SYSTEMS USA, INC.

CONDENSED NOTES TO CONSOLIDATED FINANCIAL STATEMENTS

September 30, 2013

(Unaudited)

1. Business and Organization

        Comfort Systems USA, Inc., a Delaware corporation, provides comprehensive heating, ventilation and air conditioning ("HVAC") installation, maintenance, repair and replacement services within the mechanical services industry. We operate primarily in the commercial, industrial and institutional HVAC markets and perform most of our services within office buildings, retail centers, apartment complexes, manufacturing plants and healthcare, education and government facilities. In addition to standard HVAC services, we provide specialized applications such as building automation control systems, fire protection, process cooling, electronic monitoring and process piping. Certain locations also perform related activities such as electrical service and plumbing. Approximately 43% of our consolidated 2013 revenue is attributable to installation of systems in newly constructed facilities, with the remaining 57% attributable to maintenance, repair and replacement services. The following service activities account for our consolidated 2013 revenue: HVAC 75%, plumbing 15%, building automation control systems 6% and other 4%. These service activities are within the mechanical services industry which is the single industry segment we serve.

2. Summary of Significant Accounting Policies

Basis of Presentation

        These interim statements should be read in conjunction with the historical consolidated financial statements and related notes of Comfort Systems included in the Annual Report on Form 10-K as filed with the Securities and Exchange Commission ("SEC") for the year ended December 31, 2012 (the "Form 10-K").

        The accompanying unaudited consolidated financial statements were prepared using generally accepted accounting principles for interim financial information and the instructions to Form 10-Q and applicable rules of Regulation S-X of the SEC. Accordingly, these financial statements do not include all the footnotes required by generally accepted accounting principles for complete financial statements and should be read in conjunction with the Form 10-K. We believe all adjustments necessary for a fair presentation of these interim statements have been included and are of a normal and recurring nature. The results of operations for interim periods are not necessarily indicative of the results for the full fiscal year.

Use of Estimates

        The preparation of financial statements in conformity with generally accepted accounting principles requires the use of estimates and assumptions by management in determining the reported amounts of assets and liabilities, revenue and expenses and disclosures regarding contingent assets and liabilities. Actual results could differ from those estimates. The most significant estimates used in our financial statements affect revenue and cost recognition for construction contracts, the allowance for doubtful accounts, self-insurance accruals, deferred tax assets, warranty accruals, fair value accounting for acquisitions and the quantification of fair value for reporting units in connection with our goodwill impairment testing.

5

COMFORT SYSTEMS USA, INC.

CONDENSED NOTES TO CONSOLIDATED FINANCIAL STATEMENTS (Continued)

September 30, 2013

(Unaudited)

2. Summary of Significant Accounting Policies (Continued)

Cash Flow Information

        We consider all highly liquid investments purchased with an original maturity of three months or less to be cash equivalents.

        Cash paid (in thousands) for:

	Three Months Ended September 30,				Nine Months Ended September 30,
	2013		2012		2013		2012
Interest	$	269	$	320	$	789	$	984
Income taxes for continuing operations		1,928		1,578		5,051		3,107
Income taxes for discontinued operations		—		—		—		5
Total	$	2,197	$	1,898	$	5,840	$	4,096

Income Taxes

        We are subject to income tax in the United States and Puerto Rico and we file a consolidated return for federal income tax purposes. Income taxes are provided for under the liability method, which takes into account differences between financial statement treatment and tax treatment of certain transactions.

        Deferred income taxes are based on the difference between the financial reporting and tax basis of assets and liabilities. The deferred income tax provision represents the change during the reporting period in the deferred tax assets and deferred tax liabilities, net of the effect of acquisitions and dispositions. Deferred tax assets include tax loss and credit carry-forwards and are reduced by a valuation allowance if, based on available evidence, it is more likely than not that some portion or all of the deferred tax assets will not be realized.

        We regularly evaluate valuation allowances established for deferred tax assets for which future realization is uncertain. We perform this evaluation each quarter. Estimations of required valuation allowances include estimates of future taxable income. The ultimate realization of deferred tax assets is dependent upon the generation of future taxable income during the periods in which the activity underlying these assets becomes deductible. We consider projected future taxable income and tax planning strategies in making this assessment. If actual future taxable income is less than the estimates, we may not realize all or a portion of the recorded deferred tax assets.

        Significant judgment is required in assessing the timing and amounts of deductible and taxable items. We establish reserves when, despite our belief that our tax return positions are fully supportable, we believe that certain positions may be challenged and potentially disallowed. When facts and circumstances change, we adjust these reserves through our provision for income taxes.

        To the extent interest and penalties may be assessed by taxing authorities on any underpayment of income tax, such amounts have been accrued and are classified as a component of income tax expense in our consolidated statements of operations.

6

COMFORT SYSTEMS USA, INC.

CONDENSED NOTES TO CONSOLIDATED FINANCIAL STATEMENTS (Continued)

September 30, 2013

(Unaudited)

2. Summary of Significant Accounting Policies (Continued)

        For the nine months ended September 30, 2013 our tax expense is $14.4 million with an effective tax rate of 38.8% as compared to tax expense of $6.0 million with an effective tax rate of 46.5% for the nine months ended September 30, 2012. The effective rate for 2013 is higher than the federal statutory rate of 35.0% primarily due to state income taxes (3.8%). The effective rate for 2012 is higher than the federal statutory rate of 35.0% primarily due to the impact of the noncontrolling interest of EAS which for tax purposes is treated as a partnership (4.4%), state income taxes (3.2%) and an increase in tax reserves (3.1%). Tax reserves are analyzed and adjusted quarterly as events occur to warrant such changes. Adjustments to tax reserves are a component of the effective tax rate.

Financial Instruments

        Our financial instruments consist of cash and cash equivalents, accounts receivable, other receivables, accounts payable, notes to former owners and a revolving credit facility. We believe that the carrying values of these instruments on the accompanying balance sheets approximate their fair values.

Segment Disclosure

        Our activities are within the mechanical services industry which is the single industry segment we serve. Each operating subsidiary represents an operating segment and these segments have been aggregated, as the operating units meet all of the aggregation criteria.

Reclassifications

        Certain reclassifications have been made in prior period financial statements to conform to current period presentation. These reclassifications are of a normal and recurring nature or are due to discontinued operations accounting related to the shutdown of our Delaware operation in 2012. Neither have resulted in any changes to previously reported net income for any periods.

Accounting Adjustment

        The accompanying financial statements for the nine months ended September 30, 2013 include the correction of prior period accounting errors which resulted in additional net after-tax income in the period of approximately $1.3 million. We determined that the errors primarily impacted years prior to 2010. These corrections are reflected on a pretax basis in revenue, cost of sales and selling, general, and administrative expenses, which include $3.3 million, $0.8 million and $0.3 million, respectively.

        We have considered the guidance found in ASC 250-10 and ASC 270-10 (SEC Staff Accounting Bulletin No. 99, Materiality, Accounting Bulletin No. 108, Considering the Effects of Prior Year Misstatements when Quantifying Misstatements in Current Year Financial Statements), in evaluating whether a restatement of prior financial statements is required as a result of the misstatement to such financial statements. ASC 250 requires that corrections of errors be recorded by restatement of prior periods if the error is material. We quantitatively and qualitatively assessed the materiality of the errors and concluded that the errors were not material to our estimate of earnings for the year ended December 31, 2013, and any of our previously issued financial statements. This conclusion is based on current internal forecasts of operating results for the year ended December 31, 2013 as well as actual

7

COMFORT SYSTEMS USA, INC.

CONDENSED NOTES TO CONSOLIDATED FINANCIAL STATEMENTS (Continued)

September 30, 2013

(Unaudited)

2. Summary of Significant Accounting Policies (Continued)

operating results for the years ended December 31, 2012 and 2011. Actual results for the year ended December 31, 2013 could differ from those forecasted and result in a different conclusion.

3. Fair Value Measurements

        We classify and disclose assets and liabilities carried at fair value in one of the following three categories:

•

Level 1—quoted prices in active markets for identical assets and liabilities;

•

Level 2—observable market based inputs or unobservable inputs that are corroborated by market data; and

•

Level 3—significant unobservable inputs in which little or no market data exists, therefore requiring an entity to develop its own assumptions.

        The following table summarizes the fair values and levels within the fair value hierarchy in which the fair value measurements fall for assets and liabilities measured on a recurring basis as of September 30, 2013 (in thousands):

			Fair Value Measurements at Reporting Date Using
	Total		Quoted Prices In Active Markets for Identical Assets (Level 1)		Significant Other Observable Inputs (Level 2)		Significant Unobservable Inputs (Level 3)
Cash and cash equivalents	$	45,305	$	45,305	$	—	$	—
Life insurance—cash surrender value	$	2,753	$	—	$	2,753	$	—
Contingent earn-out obligations	$	1,270	$	—	$	—	$	1,270

        Cash and cash equivalents consist primarily of highly rated money market funds at a variety of well-known institutions with original maturities of three months or less. The original cost of these assets approximates fair value due to their short term maturity.

        One of our operations has life insurance policies covering 40 employees with a combined face value of $40.7 million. The policies are invested in mutual funds and the fair value measurement of the cash surrender balance associated with these policies is determined using Level 2 inputs within the fair value hierarchy and will vary with investment performance. The cash surrender value of these policies is $2.8 million as of September 30, 2013 and $2.5 million as of December 31, 2012. These assets are included in "Other Noncurrent Assets" in our consolidated balance sheets.

        The valuation of our contingent earn-out obligations is determined using a probability weighted discounted cash flow method. This fair value measurement is based on significant unobservable inputs in the market and thus represents a Level 3 measurement within the fair value hierarchy. This analysis reflects the contractual terms of the purchase agreements (e.g., minimum and maximum payments, length of earn-out periods, manner of calculating any amounts due, etc.) and utilizes assumptions with regard to future cash flows, probabilities of achieving such future cash flows and a discount rate. The

8

COMFORT SYSTEMS USA, INC.

CONDENSED NOTES TO CONSOLIDATED FINANCIAL STATEMENTS (Continued)

September 30, 2013

(Unaudited)

3. Fair Value Measurements (Continued)

contingent earn-out obligations are measured at fair value each reporting period and changes in estimates of fair value are recognized in earnings.

        The table below presents a reconciliation of the fair value of our contingent earn-out obligations that use significant unobservable inputs (Level 3) (in thousands).

Balance at beginning of year	$	1,966
Issuances		—
Settlements		—
Adjustments to fair value		(696	)
Balance at end of period	$	1,270

        We measure certain assets at fair value on a nonrecurring basis. These assets are recognized at fair value when they are deemed to be other-than-temporarily impaired. We did not recognize any impairments, in the current quarter, on those assets required to be measured at fair value on a nonrecurring basis.

4. Acquisitions

        No acquisitions were completed in the first nine months of 2013. We completed one acquisition in the first quarter and two in the second quarter of 2012. These acquisitions were not material, individually or in the aggregate, and were "tucked-in" with existing operations. The results of operations of acquisitions are included in our consolidated financial statements from their respective acquisition dates. Additional contingent purchase price ("earn-out") has been or will be paid if certain acquisitions achieve predetermined profitability targets.

5. Discontinued Operations

        During the fourth quarter of 2012, we substantially completed the shutdown of our operation located in Delaware. The after tax loss for the three months ended September 30, 2013 was less than $0.1 million, while the after tax loss for the three months ended September 30, 2012 was $0.1 million. The after tax loss for the nine months ended September 30, 2013 and 2012 was $0.1 million and $0.2 million, respectively. These results have been recorded in discontinued operations under "Loss from discontinued operations, net of income tax expense (benefit)".

        Our consolidated statements of operations and the related earnings per share amounts have been restated to reflect the effects of the discontinued operations. No interest expense is allocated to discontinued operations.

        Revenue and pre-tax loss related to discontinued operations are as follows (in thousands):

	Three Months Ended September 30,						Nine Months Ended September 30,
	2013			2012			2013			2012
Revenue	$	—		$	299		$	22		$	4,385
Pre-tax loss	$	(43	)	$	(21	)	$	(136	)	$	(200	)

9

COMFORT SYSTEMS USA, INC.

CONDENSED NOTES TO CONSOLIDATED FINANCIAL STATEMENTS (Continued)

September 30, 2013

(Unaudited)

6. Goodwill and Identifiable Intangible Assets, Net

Goodwill

        The changes in the carrying amount of goodwill are as follows (in thousands):

	September 30, 2013		December 31, 2012
Balance at beginning of year	$	114,588	$	107,093
Additions		—		7,495
Balance at end of period	$	114,588	$	114,588

Identifiable Intangible Assets, Net

        Identifiable intangible assets consist of the following (dollars in thousands):

		September 30, 2013					December 31, 2012
	Estimated Useful Lives in Years	Gross Book Value		Accumulated Amortization			Gross Book Value		Accumulated Amortization
Customer relationships	1 - 15	$	40,404	$	(19,639	)	$	40,404	$	(15,579	)
Backlog	1 - 2		6,515		(6,515	)		6,515		(6,375	)
Noncompete agreements	2 - 7		2,890		(2,594	)		2,890		(2,380	)
Tradenames	2 - 25		23,695		(5,649	)		23,695		(4,655	)
Total		$	73,504	$	(34,397	)	$	73,504	$	(28,989	)

7. Long-Term Debt Obligations

        Long-term debt obligations consist of the following (in thousands):

	September 30, 2013			December 31, 2012
Revolving credit facility	$	5,000		$	—
Other debt		—			2,400
Notes to former owners		2,000			5,000
Total debt		7,000			7,400
Less—current portion		(2,000	)		(300	)
Total long-term portion of debt	$	5,000		$	7,100

Revolving Credit Facility

        On June 25, 2013, we amended our senior credit facility (the "Facility") provided by a syndicate of banks increasing our borrowing capacity from $125.0 million to $175.0 million. The Facility, which is available for borrowings and letters of credit, expires in July 2018 and is secured by a first lien on substantially all of the Company's personal property except for assets related to projects subject to

10

COMFORT SYSTEMS USA, INC.

CONDENSED NOTES TO CONSOLIDATED FINANCIAL STATEMENTS (Continued)

September 30, 2013

(Unaudited)

7. Long-Term Debt Obligations (Continued)

surety bonds and assets held by certain unrestricted subsidiaries and a second lien on the Company's assets related to projects subject to surety bonds. We incurred approximately $0.6 million in financing and professional costs in connection with the amendment to the Facility, which combined with the previous unamortized costs of $0.7 million, will be amortized on a straight-line basis as a non-cash charge to interest expense over the remaining term of the Facility. As of September 30, 2013, we had $5.0 million of outstanding borrowings, $50.7 million in letters of credit outstanding and $119.3 million of credit available.

        There are two interest rate options for borrowings under the Facility, the Base Rate Loan Option and the Eurodollar Rate Loan Option. These rates are floating rates determined by the broad financial markets, meaning they can and do move up and down from time to time. Additional margins are then added to these two rates.

        The following is a summary of the additional margins:

	Consolidated Total Indebtedness to Credit Facility Adjusted EBITDA
	Less than 0.75			0.75 to 1.50			1.50 to 2.25			2.25 or greater
Additional Per Annum Interest Margin Added Under:
Base Rate Loan Option		0.25	%		0.50	%		0.75	%		1.00	%
Eurodollar Rate Loan Option		1.25	%		1.50	%		1.75	%		2.00	%

        The weighted average interest rate applicable to the borrowings under the Facility was approximately 1.4% as of September 30, 2013.

        We have used letters of credit to guarantee performance under our contracts and to ensure payment to our subcontractors and vendors under those contracts. Our lenders issue such letters of credit through the Facility for a fee. We have never had a claim made against a letter of credit that resulted in payments by a lender or by us and believe such claims are unlikely in the foreseeable future. The letter of credit fees range from 1.25% to 2.00% per annum, based on the ratio of Consolidated Total Indebtedness to Credit Facility Adjusted EBITDA, as defined in the credit agreement.

        Commitment fees are payable on the portion of the revolving loan capacity not in use for borrowings or letters of credit at any given time. These fees range from 0.20% to 0.35% per annum, based on the ratio of Consolidated Total Indebtedness to Credit Facility Adjusted EBITDA, as defined in the credit agreement.

        The Facility contains financial covenants defining various financial measures and the levels of these measures with which we must comply. Covenant compliance is assessed as of each quarter end.

        The Facility's principal financial covenants include:

        Leverage Ratio—The Facility requires that the ratio of our Consolidated Total Indebtedness to our Credit Facility Adjusted EBITDA not exceed 3.00 through December 31, 2014, 2.75 through December 31, 2015 and 2.50 through maturity. The leverage ratio as of September 30, 2013 was 0.10.

11

COMFORT SYSTEMS USA, INC.

CONDENSED NOTES TO CONSOLIDATED FINANCIAL STATEMENTS (Continued)

September 30, 2013

(Unaudited)

7. Long-Term Debt Obligations (Continued)

        Fixed Charge Coverage Ratio—The Facility requires that the ratio of Credit Facility Adjusted EBITDA, less non-financed capital expenditures, tax provision, dividends and amounts used to repurchase stock to the sum of interest expense and scheduled principal payments of indebtedness be at least 2.00; provided that the calculation of the fixed charge coverage ratio excludes stock repurchases and the payment of dividends at any time that the Company's Net Leverage Ratio does not exceed 1.50. The Facility also allows the fixed charge coverage ratio not to be reduced for stock repurchases through June 30, 2015 in an aggregate amount not to exceed $25 million if at the time of and after giving effect to such repurchase the Company's Net Leverage Ratio was less than or equal to 1.50. Capital expenditures, tax provision, dividends and stock repurchase payments are defined under the Facility for purposes of this covenant to be amounts for the four quarters ending as of any given quarterly covenant compliance measurement date. The fixed charge coverage ratio as of September 30, 2013 was 11.14.

        Other Restrictions—The Facility permits acquisitions of up to $20.0 million per transaction, provided that the aggregate purchase price of such an acquisition and of acquisitions in the same fiscal year does not exceed $50.0 million. However, these limitations only apply when the Company's Net Leverage Ratio is equal to or greater than 2.00.

        While the Facility's financial covenants do not specifically govern capacity under the Facility, if our debt level under the Facility at a quarter-end covenant compliance measurement date were to cause us to violate the Facility's leverage ratio covenant, our borrowing capacity under the Facility and the favorable terms that we currently have could be negatively impacted by the lenders.

        We are in compliance with all of our financial covenants as of September 30, 2013.

Notes to Former Owners

        We issued subordinated notes to the former owners of acquired companies as part of the consideration used to acquire these companies. These notes had an outstanding balance of $2.0 million as of September 30, 2013 and bear interest, payable annually, at a weighted average interest rate of 3.3%. The maturity date of the outstanding balance is July 2014.

Other Debt

        In conjunction with our acquisition of ColonialWebb in 2010, we acquired long-term debt related to an industrial revenue bond associated with its office building and warehouse. In July 2013, we paid the outstanding balance of $2.4 million. The weighted average interest rate on this variable rate debt as of the last day outstanding was approximately 0.21%.

        In addition, our majority owned subsidiary, EAS, has a revolving $2.5 million credit line that is available for temporary working capital needs and expires June 30, 2014. As of September 30, 2013, we had no outstanding borrowings and, therefore, $2.5 million of credit available. We estimate that the weighted average interest rate applicable to borrowings under this variable rate credit line would be approximately 2.7% as of September 30, 2013.

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COMFORT SYSTEMS USA, INC.

CONDENSED NOTES TO CONSOLIDATED FINANCIAL STATEMENTS (Continued)

September 30, 2013

(Unaudited)

8. Commitments and Contingencies

Claims and Lawsuits

        We are subject to certain legal and regulatory claims, including lawsuits arising in the normal course of business. We maintain various insurance coverages to minimize financial risk associated with these claims. We have estimated and provided accruals for probable losses and related legal fees associated with certain litigation in the accompanying consolidated financial statements. While we cannot predict the outcome of these proceedings, in management's opinion and based on reports of counsel, any liability arising from these matters individually and in the aggregate will not have a material effect on our operating results, cash flows or financial condition, after giving effect to provisions already recorded.

Surety

        Many customers, particularly in connection with new construction, require us to post performance and payment bonds issued by a financial institution known as a surety. If we fail to perform under the terms of a contract or to pay subcontractors and vendors who provided goods or services under a contract, the customer may demand that the surety make payments or provide services under the bond. We must reimburse the surety for any expenses or outlays it incurs. To date, we are not aware of any losses to our sureties in connection with bonds the sureties have posted on our behalf, and do not expect such losses to be incurred in the foreseeable future.

        Surety market conditions remain challenging as a result of significant losses incurred by many sureties in recent periods, both in the construction industry as well as in certain larger corporate bankruptcies. As a result, less bonding capacity is available in the market and terms have become more restrictive. Further, under standard terms in the surety market, sureties issue bonds on a project-by-project basis, and can decline to issue bonds at any time. Historically, approximately 25% to 35% of our business has required bonds. While we have strong surety relationships to support our bonding needs, current market conditions as well as changes in the sureties' assessment of our operating and financial risk could cause the sureties to decline to issue bonds for our work. If that were to occur, the alternatives include doing more business that does not require bonds, posting other forms of collateral for project performance such as letters of credit or cash, and seeking bonding capacity from other sureties. We would likely also encounter concerns from customers, suppliers and other market participants as to our creditworthiness. While we believe our general operating and financial characteristics, including a significant amount of cash on our balance sheet, would enable us to ultimately respond effectively to an interruption in the availability of bonding capacity, such an interruption would likely cause our revenue and profits to decline in the near term.

Self-Insurance

        We are substantially self-insured for workers' compensation, employer's liability, auto liability, general liability and employee group health claims, in view of the relatively high per-incident deductibles we absorb under our insurance arrangements for these risks. Losses up to deductible amounts are estimated and accrued based upon known facts, historical trends and industry averages. Loss estimates associated with the larger and longer-developing risks, such as workers' compensation, auto liability and general liability, are reviewed by a third-party actuary quarterly.

13

COMFORT SYSTEMS USA, INC.

CONDENSED NOTES TO CONSOLIDATED FINANCIAL STATEMENTS (Continued)

September 30, 2013

(Unaudited)

9. Stockholders' Equity

Earnings Per Share

        Basic earnings per share ("EPS") is computed by dividing net income by the weighted average number of shares of common stock outstanding during the period. Diluted EPS is computed considering the dilutive effect of stock options, contingently issuable restricted stock and restricted stock units.

        There were no anti-dilutive stock options for the three and nine months ended September 30, 2013. There were approximately 1.0 million of anti-dilutive stock options excluded from the calculation of diluted EPS for both the three and nine months ended September 30, 2012.

        The following table reconciles the number of shares outstanding with the number of shares used in computing basic and diluted earnings per share for each of the periods presented (in thousands):

	Three Months Ended September 30,					Nine Months Ended September 30,
	2013			2012		2013			2012
Common shares outstanding, end of period(a)		37,296			37,125		37,296			37,125
Effect of using weighted average common shares outstanding		(3	)		30		(112	)		1
Shares used in computing earnings per share—basic		37,293			37,155		37,184			37,126
Effect of shares issuable under stock option plans based on the treasury stock method		245			90		153			91
Effect of contingently issuable restricted shares		93			87		107			48
Shares used in computing earnings per share—diluted		37,631			37,332		37,444			37,265

(a)

Excludes 0.1 million and 0.2 million shares of unvested contingently issuable restricted stock outstanding as of September 30, 2013 and 2012, respectively.

Share Repurchase Program

        On March 29, 2007, our Board of Directors (the "Board") approved a stock repurchase program to acquire up to 1.0 million shares of our outstanding common stock. Subsequently, the Board has from time to time approved extensions of the program to acquire additional shares. Since the inception of the repurchase program, the Board has approved 6.6 million shares to be repurchased.

        The share repurchases will be made from time to time at our discretion in the open market or privately negotiated transactions as permitted by securities laws and other legal requirements, and subject to market conditions and other factors. The Board may modify, suspend, extend or terminate the program at any time. We repurchased 0.1 million shares during the nine months ended September 30, 2013 at an average price of $14.59 per share. Since the inception of the program in 2007 and as of September 30, 2013, we have repurchased a cumulative total of 6.0 million shares at an average price of $11.00 per share.

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Item 2.    Management's Discussion and Analysis of Financial Condition and Results of Operations

        The following discussion should be read in conjunction with our historical Consolidated Financial Statements and related notes included elsewhere in this Form 10-Q and the Annual Report on Form 10-K filed with the Securities and Exchange Commission for the year ended December 31, 2012 (the "Form 10-K"). This discussion contains "forward-looking statements" regarding our business and industry within the meaning of the Private Securities Litigation Reform Act of 1995. These statements are based on our current plans and expectations and involve risks and uncertainties that could cause our actual future activities and results of operations to be materially different from those set forth in the forward-looking statements. Important factors that could cause actual results to differ include risks set forth in "Item 1A. Risk Factors" included in our Form 10-K. The terms "Comfort Systems," "we," "us," or "the Company," refer to Comfort Systems USA, Inc. or Comfort Systems USA, Inc. and its consolidated subsidiaries, as appropriate in the context.

Introduction and Overview

        We are a national provider of comprehensive HVAC installation, maintenance, repair and replacement services within the mechanical services industry. We operate primarily in the commercial, industrial and institutional HVAC markets and perform most of our services within office buildings, retail centers, apartment complexes, manufacturing plants and healthcare, education and government facilities. In addition to standard HVAC services, we provide specialized applications such as building automation control systems, fire protection, process cooling, electronic monitoring and process piping. Certain locations also perform related activities such as electrical service and plumbing.

Nature and Economics of Our Business

        Approximately 83% of our revenue is earned on a project basis for installation of HVAC systems in newly constructed facilities or for replacement of HVAC systems in existing facilities. Customers hire us to ensure such systems deliver specified or generally expected heating, cooling, conditioning and circulation of air in a facility. This entails installing core system equipment such as packaged heating and air conditioning units, or in the case of larger facilities, separate core components such as chillers, boilers, air handlers and cooling towers. We also typically install connecting and distribution elements such as piping and ducting. Our responsibilities usually require conforming the systems to pre-established engineering drawings and equipment and performance specifications, which we frequently participate in establishing. Our project management responsibilities include staging equipment and materials to project sites, deploying labor to perform the work and coordinating with other service providers on the project, including any subcontractors we might use to deliver our portion of the work.

        When competing for project business, we usually estimate the costs we will incur on a project, and then propose a bid to the customer that includes a contract price and other performance and payment terms. Our bid price and terms are intended to cover our estimated costs on the project and provide a profit margin to us commensurate with the value of the installed system to the customer, the risk that project costs or duration will vary from estimate, the schedule on which we will be paid, the opportunities for other work that we might forego by committing capacity to this project, and other costs that we incur more broadly to support our operations but which are not specific to the project. Typically customers will seek bids from competitors for a given project. While the criteria on which customers select the winning bid vary widely and include factors such as quality, technical expertise, on-time performance, post-project support and service, and company history and financial strength, we believe that price is the most influential factor for most customers in choosing an HVAC installation and service provider.

15

        After a customer accepts our bid, we generally enter into a contract with the customer that specifies what we will deliver on the project, what our related responsibilities are, and how much and when we will be paid. Our overall price for the project is typically set at a fixed amount in the contract, although changes in project specifications or work conditions that result in unexpected additional work are usually subject to additional payment from the customer via what are commonly known as change orders. Project contracts typically provide for periodic billings to the customer as we meet progress milestones or incur cost on the project. Project contracts in our industry also frequently allow for a small portion of progress billings or contract price to be withheld by the customer until after we have completed the work, typically for six months. Amounts withheld under this practice are known as retention or retainage.

        Labor and overhead costs account for the majority of our cost of service. Accordingly, labor management and utilization have the most impact on our project performance. Given the fixed price nature of much of our project work, if our initial estimate of project costs is wrong or we incur cost overruns that cannot be recovered in change orders, we can experience reduced profits or even significant losses on fixed price project work. We also perform some project work on a cost-plus or a time and materials basis, under which we are paid our costs incurred plus an agreed-upon profit margin. These margins are typically less than fixed-price contract margins because there is less risk of unrecoverable cost overruns in cost-plus or time and materials work.

        Our average project takes six to nine months to complete, with an average contract price of approximately $427,000. We also perform larger HVAC projects. Generally, projects closer in size to $1 million will be completed in one year or less. It is unusual for us to work on a project that exceeds two years in length. Our projects generally require working capital funding of equipment and labor costs. Customer payments on periodic billings generally do not recover these costs until late in the job. Our average project duration together with typical retention terms as discussed above generally allow us to complete the realization of revenue and earnings in cash within one year. We have what we believe is a well-diversified distribution of revenue across end-use sectors that we believe reduces our exposure to negative developments in any given sector. Because of the integral nature of HVAC and related controls systems to most buildings, we have the legal right in almost all cases to attach liens to buildings or related funding sources when we have not been fully paid for installing systems, except with respect to some government buildings. The service work that we do, which is discussed further below, usually does not give rise to lien rights.

        A stratification of projects in progress as of September 30, 2013, by contract price, is as follows:

Contract Price of Project	No. of Projects		Aggregate Contract Price Value (millions)
Under $1 million		4,027	$	369.0
$1 million - $5 million		302		702.8
$5 million - $10 million		59		398.1
$10 million - $15 million		16		192.5
Greater than $15 million		9		221.8
Total		4,413	$	1,884.2

        In addition to project work, approximately 17% of our revenue represents maintenance and repair service on already-installed HVAC and controls systems. This kind of work usually takes from a few hours to a few days to perform. Prices to the customer are usually based on the equipment and materials used in the service as well as technician labor time. We usually bill the customer for service work when it is complete, typically with payment terms of up to thirty days. We also provide

16

maintenance and repair service under ongoing contracts. Under these contracts, we are paid regular monthly or quarterly amounts and provide specified service based on customer requirements. These agreements typically cover periods ranging from one to three years with thirty- to sixty-day cancellation notice periods.

        A relatively small portion of our revenue comes from national and regional account customers. These customers typically have multiple sites, and contract with us to perform maintenance and repair service. These contracts may also provide for us to perform new or replacement systems installation. We operate a national call center to dispatch technicians to sites requiring service. We perform the majority of this work with our own employees, with the balance being subcontracted to third parties that meet our performance qualifications. We will also typically use proprietary information systems to maintain information on the customer's sites and equipment, including performance and service records, and related cost data. These systems track the status of ongoing service and installation work, and may also monitor system performance data. Under these contractual relationships, we usually provide consolidated billing and credit payment terms to the customer.

Profile and Management of Our Operations

        We manage our 36 operating units based on a variety of factors. Financial measures we emphasize include profitability, and use of capital as indicated by cash flow and by other measures of working capital principally involving project cost, billings and receivables. We also monitor selling, general, administrative and indirect project support expense, backlog, workforce size and mix, growth in revenue and profits, variation of actual project cost from original estimate, and overall financial performance in comparison to budget and updated forecasts. Operational factors we emphasize include project selection, estimating, pricing, management and execution practices, labor utilization, safety, training, and the make-up of both existing backlog as well as new business being pursued, in terms of project size, technical application and facility type, end-use customers and industries, and location of the work.

        Most of our operations compete on a local or regional basis. Attracting and retaining effective operating unit managers is an important factor in our business, particularly in view of the relative uniqueness of each market and operation, the importance of relationships with customers and other market participants such as architects and consulting engineers, and the high degree of competition and low barriers to entry in most of our markets. Accordingly, we devote considerable attention to operating unit management quality, stability and contingency planning, including related considerations of compensation, and non-competition protection where applicable.

Economic and Industry Factors

        As an HVAC and building controls services provider, we operate in the broader nonresidential construction services industry and are affected by trends in this sector. While we do not have operations in all major cities of the United States, we believe our national presence is sufficiently large that we experience trends in demand for and pricing of our services that are consistent with trends in the national nonresidential construction sector. As a result, we monitor the views of major construction sector forecasters along with macroeconomic factors they believe drive the sector, including trends in gross domestic product, interest rates, business investment, employment, demographics and the general fiscal condition of federal, state and local governments.

        Spending decisions for building construction, renovation and system replacement are generally made on a project basis, usually with some degree of discretion as to when and if projects proceed. With larger amounts of capital, time and discretion involved, spending decisions are affected to a significant degree by uncertainty, particularly concerns about economic and financial conditions and trends. We have experienced periods of time when economic weakness caused a significant slowdown in decisions to proceed with installation and replacement project work.

17

Operating Environment and Management Emphasis

        Nonresidential building construction and renovation activity, as reported by the federal government, declined over the three year period of 2001 to 2003, expanded moderately during 2004 and 2005, and was strong over the three year period from 2006 to 2008. We experienced significant industry activity declines over the four year period from 2009 to 2012, and 2013 activity levels have been stable compared to recent years. During the periods of decline, we responded to market challenges by pursuing work in sectors less affected by the downturn, such as government, educational and healthcare facilities, and by establishing marketing initiatives that take advantage of our size and range of expertise. We also responded to declining gross profits over those years by reducing our selling, general and administrative expenses, and our indirect project and service overhead costs. We believe our efforts in these areas partially offset the decline in our profitability over that period.

        As a result of our continued strong emphasis on cash flow, we currently have modest indebtedness and significant uncommitted cash balances, as discussed further in "Liquidity and Capital Resources" below. We have a credit facility in place with considerably less restrictive terms than those of our previous facilities; this facility does not expire until July 2018. We have strong surety relationships to support our bonding needs, and we believe our relationships with the surety markets are positive in light of our strong current results and financial position. We have generated positive free cash flow in each of the last fourteen calendar years and will continue our emphasis in this area. We believe that the relative size and strength of our balance sheet and surety support as compared to most companies in our industry represent competitive advantages for us.

        As discussed at greater length in "Results of Operations" below, we have seen declining activity levels in our industry since late 2008 and we expect price competition to continue to be strong, as local and regional competitors respond cautiously to changing conditions. We will continue our efforts to find the more active sectors in our markets, and to increase our regional and national account business. Our primary emphasis for the remainder of 2013 will be on execution and on preserving our core workforce. We have increased our focus on project qualification, estimating, pricing and management, and on service growth and performance.

Cyclicality and Seasonality

        Historically, the construction industry has been highly cyclical. As a result, our volume of business may be adversely affected by declines in new installation and replacement projects in various geographic regions of the United States during periods of economic weakness.

        The HVAC industry is subject to seasonal variations. Specifically, the demand for new installation and replacement is generally lower during the winter months (the first quarter of the year) due to reduced construction activity during inclement weather and less use of air conditioning during the colder months. Demand for HVAC services is generally higher in the second and third calendar quarters due to increased construction activity and increased use of air conditioning during the warmer months. Accordingly, we expect our revenue and operating results generally will be lower in the first and fourth calendar quarters.

Critical Accounting Policies

        Our critical accounting policies are based upon the significance of the accounting policy to our overall financial statement presentation, as well as the complexity of the accounting policy and our use of estimates and subjective assessments. Our most critical accounting policy is revenue recognition. As discussed elsewhere in this quarterly report on Form 10-Q, our business has two service functions: (i) installation, which we account for under the percentage of completion method, and (ii) maintenance, repair and replacement, which we account for as the services are performed, or in the case of replacement, under the percentage of completion method. In addition, we identified other

18

critical accounting policies related to our allowance for doubtful accounts receivable, the recording of our self-insurance liabilities, valuation of deferred tax assets, accounting for acquisitions and the recoverability of goodwill and identifiable intangible assets. These accounting policies, as well as others, are described as follows and in Note 2 to the Consolidated Financial Statements included elsewhere in this quarterly report on Form 10-Q.

Percentage of Completion Method of Accounting

        Approximately 83% of our revenue was earned on a project basis and recognized through the percentage of completion method of accounting. Under this method contract revenue recognizable at any time during the life of a contract is determined by multiplying expected total contract revenue by the percentage of contract costs incurred at any time to total estimated contract costs. More specifically, as part of the negotiation and bidding process in which we engage in connection with obtaining installation contracts, we estimate our contract costs, which include all direct materials (exclusive of rebates), labor and subcontract costs and indirect costs related to contract performance, such as indirect labor, supplies, tools, repairs and depreciation costs. These contract costs are included in our results of operations under the caption "Cost of Services." Then, as we perform under those contracts, we measure costs incurred, compare them to total estimated costs to complete the contract, and recognize a corresponding proportion of contract revenue. Labor costs are considered to be incurred as the work is performed. Subcontractor labor is recognized as the work is performed, but is generally subjected to approval as to milestones or other evidence of completion. Non-labor project costs consist of purchased equipment, prefabricated materials and other materials. Purchased equipment on our projects is substantially produced to job specifications and is a value added element to our work. The costs are considered to be incurred when title is transferred to us, which typically is upon delivery to the worksite. Prefabricated materials, such as ductwork and piping, are generally performed at our shops and recognized as contract costs when fabricated for the unique specifications of the job. Other materials cost are not significant and are generally recorded when delivered to the worksite. This measurement and comparison process requires updates to the estimate of total costs to complete the contract, and these updates may include subjective assessments.

        We generally do not incur significant costs prior to receiving a contract, and therefore, these costs are expensed as incurred. In limited circumstances, when significant pre-contract costs are incurred, they are deferred if the costs can be directly associated with a specific contract and if their recoverability from the contract is probable. Upon receiving the contract, these costs are included in contract costs. Deferred costs associated with unsuccessful contract bids are written off in the period that we are informed that we will not be awarded the contract.

        Project contracts typically provide for a schedule of billings or invoices to the customer based on reaching agreed-upon milestones or as we incur costs. The schedules for such billings usually do not precisely match the schedule on which costs are incurred. As a result, contract revenue recognized in the statement of operations can and usually do differ from amounts that can be billed or invoiced to the customer at any point during the contract. Amounts by which cumulative contract revenue recognized on a contract as of a given date exceed cumulative billings to the customer under the contract are reflected as a current asset in our balance sheet under the caption "Costs and estimated earnings in excess of billings." Amounts by which cumulative billings to the customer under a contract as of a given date exceed cumulative contract revenue recognized on the contract are reflected as a current liability in our balance sheet under the caption "Billings in excess of costs and estimated earnings."

        The percentage of completion method of accounting is also affected by changes in job performance, job conditions and final contract settlements. These factors may result in revisions to estimated costs and, therefore, revenue. Such revisions are frequently based on further estimates and subjective assessments. The effects of these revisions are recognized in the period in which revisions are determined. When such revisions lead to a conclusion that a loss will be recognized on a contract, the full amount of the estimated ultimate loss is recognized in the period such conclusion is reached, regardless of the percentage of completion of the contract.

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        Revisions to project costs and conditions can give rise to change orders under which the customer agrees to pay additional contract price. Revisions can also result in claims we might make against the customer to recover project variances that have not been satisfactorily addressed through change orders with the customer. Except in certain circumstances, we do not recognize revenue or margin based on change orders or claims until they have been agreed upon with the customer. The amount of revenue associated with unapproved change orders and claims is currently immaterial. Variations from estimated project costs could have a significant impact on our operating results, depending on project size, and the recoverability of the variation via additional customer payments.

Accounting for Allowance for Doubtful Accounts

        We are required to estimate the collectability of accounts receivable and provide an allowance for doubtful accounts for receivable amounts we believe it is probable we will not ultimately collect. This requires us to make certain judgments and estimates involving, among others, the creditworthiness of our customers, prior collection history with our customers, ongoing relationships with our customers, the aging of past due balances, our lien rights, if any, in the property where we performed the work, and the availability, if any, of payment bonds applicable to the contract. These estimates are evaluated and adjusted as needed when additional information is received.

Accounting for Self-Insurance Liabilities

        We are substantially self-insured for workers' compensation, employer's liability, auto liability, general liability and employee group health claims in view of the relatively high per-incident deductibles we absorb under our insurance arrangements for these risks. Losses up to deductible amounts are estimated and accrued based upon known facts, historical trends and industry averages. Loss estimates associated with the larger and longer-developing risks—workers' compensation, auto liability and general liability—are reviewed by a third party actuary quarterly. We believe these accruals are adequate. However, insurance liabilities are difficult to estimate due to unknown factors, including the severity of an injury, the determination of our liability in proportion to other parties, timely reporting of occurrences, ongoing treatment or loss mitigation, general trends in litigation recovery outcomes and the effectiveness of safety and risk management programs. Therefore, if actual experience differs from the assumptions and estimates used for recording the liabilities, adjustments may be required and would be recorded in the period that such experience becomes known.

        Our self-insurance arrangements currently are as follows:

        Workers' Compensation—The per-incident deductible for workers' compensation is $500,000. Losses above $500,000 are determined by statutory rules on a state-by-state basis, and are fully covered by excess workers' compensation insurance.

        Employer's Liability—For employer's liability, the per incident deductible is $500,000. We are fully insured for the next $500,000 of each loss, and then have several layers of excess loss insurance policies that cover losses up to $100 million in aggregate across this risk area (as well as general liability and auto liability noted below).

        General Liability—For general liability, the per incident deductible is $500,000. We are fully insured for the next $1.5 million of each loss, and then have several layers of excess loss insurance policies that cover losses up to $100 million in aggregate across this risk area (as well as employer's liability noted above and auto liability noted below).

        Auto Liability—For auto liability, the per incident deductible is $500,000. We are fully insured for the next $1.5 million of each loss, and then have several layers of excess loss insurance policies that cover losses up to $100 million in aggregate across this risk area (as well as employer's liability and general liability noted above).

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        Employee Medical—We have two medical plans. The deductible for employee group health claims is $325,000 per person, per policy (calendar) year for each plan. Insurance then covers any responsibility for medical claims in excess of the deductible amount.

        Our $100 million of aggregate excess loss coverage above applicable per-incident deductibles represents one policy limit that applies to all lines of risk; we do not have a separate $100 million of excess loss coverage for each of general liability, employer's liability and auto liability.

Accounting for Deferred Tax Assets

        We regularly evaluate valuation allowances established for deferred tax assets for which future realization is uncertain. We perform this evaluation quarterly. Estimations of required valuation allowances include estimates of future taxable income. The ultimate realization of deferred tax assets is dependent upon the generation of future taxable income during the periods in which the activity underlying these assets becomes deductible. We consider projected future taxable income and tax planning strategies in making this assessment. If actual future taxable income is less than the estimates, we may not realize all or a portion of the recorded deferred tax assets.

Acquisitions

        We recognize assets acquired and liabilities assumed in business combinations, including contingent assets and liabilities, based on fair value estimates as of the date of acquisition.

        Contingent Consideration—In certain acquisitions, we agree to pay additional amounts to sellers contingent upon achievement by the acquired businesses of certain predetermined profitability targets. We have recognized liabilities for these contingent obligations based on their estimated fair value at the date of acquisition with any differences between the acquisition date fair value and the ultimate settlement of the obligations being recognized in income from operations.

        Contingent Assets and Liabilities—Assets and liabilities arising from contingencies are recognized at their acquisition date fair value when their respective fair values can be determined. If the fair values of such contingencies cannot be determined, they are recognized at the acquisition date if the contingencies are probable and an amount can be reasonably estimated. Acquisition date fair value estimates are revised as necessary if, and when, additional information regarding these contingencies becomes available to further define and quantify assets acquired and liabilities assumed.

Recoverability of Goodwill and Identifiable Intangible Assets

        Goodwill is the excess of purchase price over the fair value of the net assets of acquired businesses. We assess goodwill for impairment each year, and more frequently if circumstances suggest an impairment may have occurred.

        When the carrying value of a given reporting unit exceeds its fair value, an impairment loss is recorded to the extent that the implied fair value of the goodwill of the reporting unit is less than its carrying value. If other reporting units have had increases in fair value, such increases may not be recorded. Accordingly, such increases may not be netted against impairments at other reporting units. The requirements for assessing whether goodwill has been impaired involve market-based information. This information, and its use in assessing goodwill, entails some degree of subjective assessment.

        We currently perform our annual impairment testing as of October 1 and any impairment charges resulting from this process are reported in the fourth quarter. We segregate our operations into reporting units based on the degree of operating and financial independence of each unit and our related management of them. We perform our annual goodwill impairment testing at the reporting unit level.

        In the evaluation of goodwill for impairment, we have the option to first assess qualitative factors to determine whether the existence of events or circumstances lead to a determination that it is more

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likely than not that the fair value of one of our reporting units is greater than its carrying value. If, after completing such assessment, we determine it is more likely than not that the fair value of a reporting unit is greater than its carrying amount, then there is no need to perform any further testing. If we conclude otherwise, then we perform the first step of a two-step impairment test by calculating the fair value of the reporting unit and comparing the fair value with the carrying value of the reporting unit.

        We estimate the fair value of the reporting unit based on two market approaches and an income approach, which utilizes discounted future cash flows. Assumptions critical to the fair value estimates under the discounted cash flow model include discount rates, cash flow projections, projected long-term growth rates and the determination of terminal values. The market approaches utilized market multiples of invested capital from comparable publicly traded companies ("public company approach") and comparable transactions ("transaction approach"). The market multiples from invested capital include revenue, book equity plus debt and earnings before interest, taxes, depreciation and amortization ("EBITDA").

        There are significant inherent uncertainties and management judgment involved in estimating the fair value of each reporting unit. While we believe we have made reasonable estimates and assumptions to estimate the fair value of our reporting units, it is possible that a material change could occur. If actual results are not consistent with our current estimates and assumptions, or the current economic downturn worsens or the projected recovery is significantly delayed beyond our projections, goodwill impairment charges may be recorded in future periods.

        We amortize identifiable intangible assets with finite lives over their useful lives. Changes in strategy and/or market condition may result in adjustments to recorded intangible asset balances or their useful lives.

Results of Operations (dollars in thousands):

	Three Months Ended September 30,												Nine Months Ended September 30,
	2013			%			2012			%			2013			%			2012			%
Revenue	$	349,989			100.0	%	$	335,241			100.0	%	$	1,026,932			100.0	%	$	1,015,315			100.0	%
Cost of services		282,968			80.9	%		279,720			83.4	%		848,477			82.6	%		862,767			85.0	%
Gross profit		67,021			19.1	%		55,521			16.6	%		178,455			17.4	%		152,548			15.0	%
Selling, general and administrative expenses		49,404			14.1	%		45,853			13.7	%		141,623			13.8	%		138,781			13.7	%
Gain on sale of assets		(117	)		—			(99	)		—			(367	)		—			(438	)		—
Operating income		17,734			5.1	%		9,767			2.9	%		37,199			3.6	%		14,205			1.4	%
Interest income		5			—			13			—			19			—			21			—
Interest expense		(347	)		(0.1	)%		(406	)		(0.1	)%		(1,032	)		(0.1	)%		(1,231	)		(0.1	)%
Changes in the fair value of contingent earn-out obligations		750			0.2	%		(38	)		—			696			0.1	%		(105	)		—
Other income (expense)		83			—			13			—			184			—			82			—
Income before income taxes		18,225			5.2	%		9,349			2.8	%		37,066			3.6	%		12,972			1.3	%
Income tax expense		6,588						3,926						14,366						6,031
Income from continuing operations		11,637						5,423						22,700						6,941
Loss from discontinued operations, net of tax		(25	)					(98	)					(79	)					(237	)
Net income including noncontrolling interests		11,612			3.3	%		5,325			1.6	%		22,621			2.2	%		6,704			0.7	%
Less: Net income (loss) attributable to noncontrolling interests		233			0.1	%		(348	)		(0.1	)%		948			0.1	%		(2,408	)		(0.2	)%
Net income attributable to Comfort Systems USA, Inc.	$	11,379					$	5,673					$	21,673					$	9,112

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        We had 37 operating locations as of December 31, 2012. During the first quarter of 2013, we consolidated one company into other operations. As of September 30, 2013, we had 36 operating locations.

        Revenue—Revenue increased $14.7 million, or 4.4%, to $350.0 million for the third quarter of 2013 compared to the same period in 2012. The increase is primarily due to our Arizona operation ($12.5 million) and our EAS operation ($9.7 million) which performed a significant amount of project work during the current quarter. This increase was partially offset by lower revenue in one of our Virginia operations ($5.5 million) and one of our Maryland operations ($3.7 million) as a result of fewer projects in progress in the current quarter compared to the same period in 2012.

        Revenue increased $11.6 million, or 1.1%, to $1,026.9 million for the first nine months of 2013 compared to the same period in 2012. The increase is primarily due to our EAS operation ($40.1 million) and our Arizona operation ($19.5 million) which performed a significant amount of project work during the first nine months of 2013. This increase was partially offset by lower revenue in our large operation headquartered in Virginia ($50.9 million), which had a fast-paced, large data center project in the first six months of 2012 which did not reoccur in 2013 due to its completion in the prior year.

        Backlog reflects revenue still to be recognized under contracted or committed installation and replacement project work. Project work generally lasts less than one year. Service agreement revenue and service work and short duration projects which are generally billed as performed do not flow through backlog. Accordingly, backlog represents only a portion of our revenue for any given future period, and it represents revenue that is likely to be reflected in our operating results over the next six to twelve months. As a result, we believe the predictive value of backlog information is limited to indications of general revenue direction over the near term, and should not be interpreted as indicative of ongoing revenue performance over several quarters.

        Backlog as of September 30, 2013 was $570.9 million, a 3.3% decrease from June 30, 2013 backlog of $590.3 million, and an 8.3% decrease from September 30, 2012 backlog of $622.8 million. Sequential backlog decreased primarily due to our Arizona operation ($13.9 million) which performed a significant amount of project work during the current quarter. The decrease was also impacted by our California operation ($9.7 million) which experienced lower project bookings in the current quarter. Our year-over-year backlog decreased primarily due to our California operation ($17.9 million), our large operation headquartered in Virginia ($14.9 million) and one of our Florida operations ($10.3 million) which have experienced lower project bookings in the current year. In addition, a decrease at our Arizona operation ($10.4 million) was due to the performance of a significant amount of project work during the current year.

        Following the three year period of industry activity declines from 2001 through 2003 noted previously, we saw modest year-over-year revenue increases at our ongoing operations beginning in mid-2003 and continuing throughout 2008. We experienced significant industry activity declines in 2009 through 2012. Based on our backlog and forecasts from industry construction analysts, we expect that activity levels in our industry are likely to remain flat over the next twelve months, particularly in the area of new construction.

        Gross Profit—Gross profit increased $11.5 million, or 20.7%, to $67.0 million for the third quarter of 2013 as compared to the same period in 2012. The increase in gross profit was primarily due to improved market conditions which resulted in an increase in volumes at our Arizona operation (approximately $2.3 million) as well as at our EAS operation (approximately $0.9 million) and, despite lower revenues, our large operation headquartered in Virginia had improved profitability (approximately $1.9 million). In addition, gross profit increased approximately $2.5 million due to a prior period accounting adjustment. These corrections are reflected on a pretax basis in revenue and costs of sales, which include $3.3 million and $0.8 million, respectively. These accounting adjustments are described in Note 2 to the Consolidated Financial Statements included elsewhere in this quarterly

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report on Form 10-Q. As a percentage of revenue, gross profit increased from 16.6% in 2012 to 19.1% in 2013 primarily due to the factors discussed above. Excluding the prior period adjustment, our gross profit percentage for the quarter would have been 18.6%.

        Gross profit increased $25.9 million, or 17.0%, to $178.5 million for the first nine months of 2013 as compared to the same period in 2012. The increase in gross profit was primarily due to improved profitability in 2013 at our EAS operation (approximately $5.8 million), improved market conditions which resulted in an increase in volumes at our Arizona operation (approximately $3.9 million), and job underperformance at one of our Maryland operations in 2012 (approximately $3.6 million). Also, gross profit increased approximately $2.5 million due to a prior period accounting adjustment. These corrections are reflected on a pretax basis in revenue and costs of sales, which include $3.3 million and $0.8 million, respectively. These accounting adjustments are described in Note 2 to the Consolidated Financial Statements included elsewhere in this quarterly report on Form 10-Q. As a percentage of revenue, gross profit increased from 15.0% in 2012 to 17.4% in 2013 primarily due to the factors discussed above. In addition, the gross profit percentage increased due to improved profitability at our large operation headquartered in Virginia despite lower revenues, and included a claim settled during the first quarter of 2013 with the general contractor on a large data center project that had been accelerated by the owner on which we recognized approximately $1.6 million of additional gross profit during the current year.

        Selling, General and Administrative Expenses ("SG&A")—SG&A increased $3.6 million, or 7.7%, to $49.4 million for the third quarter of 2013 as compared to the same period in 2012. Excluding amortization expense, SG&A increased $3.7 million, or 8.4%. This increase is primarily due to higher compensation accruals ($2.0 million) related to an increase in bonuses payable as a result of improved operating results and higher medical costs ($0.5 million) due to an increase in large dollar claims during the current quarter. In addition, SG&A increased approximately $0.3 million due to a prior period accounting adjustment. These accounting adjustments are described in Note 2 to the Consolidated Financial Statements included elsewhere in this quarterly report on Form 10-Q. Amortization expense decreased $0.1 million, or 7.8%. As a percentage of revenue, SG&A increased from 13.7% in 2012 to 14.1% in 2013 primarily due to the factors discussed above.

        SG&A increased $2.8 million, or 2.0%, to $141.6 million for the first nine months of 2013 as compared to the same period in 2012. Excluding amortization expense, SG&A increased $3.2 million, or 2.4%. This increase is primarily due to higher compensation accruals ($2.7 million) related to an increase in bonuses payable as a result of improved operating results. This increase was partially offset by a decrease in bad debt expense ($2.8 million) as a result of a receivable settlement in the prior quarter for a gain of $0.8 million, and higher than normal bad debt expense in the prior year due to specific collectability concerns at our operations in Maryland and Tennessee which do not represent trends we expect to continue in the future. In addition, SG&A increased approximately $0.3 million due to a prior period accounting adjustment. These accounting adjustments are described in Note 2 to the Consolidated Financial Statements included elsewhere in this quarterly report on Form 10-Q. Amortization expense decreased $0.4 million, or 6.4%. As a percentage of revenue, SG&A increased from 13.7% in 2012 to 13.8% in 2013 primarily due to the factors discussed above.

        We have included SG&A, excluding amortization, because we believe it is an effective measure of comparative results of operations. However, SG&A, excluding amortization, is not considered under generally accepted accounting principles to be a primary measure of an entity's financial results, and

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accordingly, should not be considered an alternative to SG&A as shown in our consolidated statements of operations.

	Three Months Ended September 30,						Nine Months Ended September 30,
	2013			2012			2013			2012
	(in thousands)
SG&A	$	49,404		$	45,853		$	141,623		$	138,781
Less: Amortization expense		(1,739	)		(1,886	)		(5,268	)		(5,626	)
SG&A, excluding amortization expense	$	47,665		$	43,967		$	136,355		$	133,155

        Changes in the Fair Value of Contingent Earn-out Obligations—The contingent earn-out obligations are measured at fair value each reporting period and changes in estimates of fair value are recognized in earnings. Income from changes in the fair value of contingent earn-out obligations increased $0.8 million for the third quarter of 2013 as compared to the same period in 2012. Based on updated measurements of estimated future cash flows, the fair value of the earnout payments related to the 2010 acquisition of ColonialWebb was higher than what we currently expect to incur. This change in estimate resulted in a $0.8 million reduction of the fair value of the liability.

        Income from changes in the fair value of contingent earn-out obligations increased $0.8 million for the first nine months of 2013 as compared to the same period in 2012. Based on updated measurements of estimated future cash flows, the fair value of the earnout payments related to the 2010 acquisition of ColonialWebb was higher than what we currently expect to incur. This change in estimate resulted in a $0.8 million reduction of the fair value of the liability.

        Income Tax Expense—We perform work throughout the United States in virtually all of the fifty states as well as in Puerto Rico. Our effective tax rate varies based upon our relative profitability, or lack of profitability, in states with varying state tax rates and rules. In addition, discrete events, judgments and legal structures can affect our effective tax rate. These items can include the tax treatment for impairment of goodwill and other intangible assets and changes in fair value of acquisition related assets and liabilities, tax reserves associated with regulatory audits, accounting for losses associated with underperforming operations and the partial ownership of consolidated entities.

        For the nine months ended September 30, 2013 our tax expense is $14.4 million with an effective tax rate of 38.8% as compared to tax expense of $6.0 million with an effective tax rate of 46.5% for the nine months ended September 30, 2012. The effective rate for 2013 is higher than the federal statutory rate of 35.0% primarily due to state income taxes (3.8%). The effective rate for 2012 is higher than the federal statutory rate of 35.0% primarily due to the impact of the noncontrolling interest of EAS which for tax purposes is treated as a partnership (4.4%), state income taxes (3.2%) and an increase in tax reserves (3.1%). Tax reserves are analyzed and adjusted quarterly as events occur to warrant such changes. Adjustments to tax reserves are a component of the effective tax rate. We currently estimate our effective tax rate for 2013 will be between 38% and 42%.

        Discontinued Operations—During the fourth quarter of 2012, we substantially completed the shutdown of our operation located in Delaware. The after tax loss for the three months ended September 30, 2013 was less than $0.1 million, while the after tax loss for the three months ended September 30, 2012 was $0.1 million. The after tax loss for the nine months ended September 30, 2013 and 2012 was $0.1 million and $0.2 million, respectively. These results have been recorded in discontinued operations under "Loss from discontinued operations, net of income tax expense (benefit)".

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        Net Income (Loss) Attributable to Noncontrolling Interests—Net income attributable to noncontrolling interests increased $0.6 million to $0.2 million for the third quarter of 2013 as compared to a loss in the same quarter in 2012. This increase reflects the impact of higher earnings at EAS, our non-wholly owned consolidated subsidiary, which was due primarily to higher revenues and better absorption of overhead in the current quarter.

        Net income attributable to noncontrolling interests increased $3.4 million to $0.9 million for the first nine months of 2013 as compared to a loss in the same period in 2012. The increase was primarily due to higher earnings in the current year caused by increased revenues and better absorption of overhead. In addition, the increase was also due to job delays and underperformance during 2012.

Outlook

        Weakness in the environment for nonresidential construction activity has persisted in 2013, and nonresidential construction activity has remained at subdued levels similar to recent years. We expect underlying weakness to continue to impact revenues for the remainder of 2013. Our backlog is lower than we have experienced in the past, although it is still at solid levels in light of industry conditions and we believe that overall our booked work and prospects are stable. Our primary emphasis for the remainder of 2013 will be on execution, including a focus on cost discipline and efficient project and service performance. Based on our backlog, and in light of weak economic conditions for our industry, we expect that revenues will continue at the lower levels that we have experienced in recent years while 2013 profitability will improve from the levels that we experienced in 2012. Based on our backlog and activity levels, we currently anticipate that 2014 revenues and profitability will be comparable to the improved levels of 2013.

Liquidity and Capital Resources (in thousands):

	Three Months Ended September 30,						Nine Months Ended September 30,
	2013			2012			2013			2012
Cash provided by (used in):
Operating activities	$	27,433		$	16,455		$	23,782		$	3,432
Investing activities		(5,170	)		(2,997	)		(11,862	)		(20,973	)
Financing activities		(304	)		(6,604	)		(7,372	)		1,969
Net increase (decrease) in cash and cash equivalents	$	21,959		$	6,854		$	4,548		$	(15,572	)
Free cash flow:
Cash provided by operating activities	$	27,433		$	16,455		$	23,782		$	3,432
Purchases of property and equipment		(5,234	)		(2,817	)		(12,471	)		(9,405	)
Proceeds from sales of property and equipment		64			205			566			967
Free cash flow	$	22,263		$	13,843		$	11,877		$	(5,006	)

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Cash Flow

        Our business does not require significant amounts of investment in long-term fixed assets. The substantial majority of the capital used in our business is working capital that funds our costs of labor and installed equipment deployed in project work until our customer pays us. Customary terms in our industry allow customers to withhold a small portion of the contract price until after we have completed the work, typically for six months. Amounts withheld under this practice are known as retention or retainage. Our average project duration together with typical retention terms generally allow us to complete the realization of revenue and earnings in cash within one year.

        Cash Provided by Operating Activities—Cash flow from operations is primarily influenced by demand for our services and operating margins, but can also be influenced by working capital needs associated with the various types of services that we provide. In particular, working capital needs may increase when we commence large volumes of work under circumstances where project costs, primarily associated with labor, equipment and subcontractors, are required to be paid before the receivables resulting from the work performed are billed and collected. Working capital needs are generally higher during the late winter and spring months as we prepare and plan for the increased project demand when favorable weather conditions exist in the summer and fall months. Conversely, working capital assets are typically converted to cash during the late summer and fall months as project completion is underway. These seasonal trends are sometimes offset by changes in the timing of major projects which can be impacted by the weather, project delays or accelerations and other economic factors that may affect customer spending.

        Cash provided by operating activities during the third quarter of 2013 was $27.4 million compared with $16.5 million during 2012. The $10.9 million increase in cash provided by operations is primarily due to improved profitability in 2013 compared to 2012. In addition, receivables had a positive impact of $7.9 million on the comparison of cash flows due to collections from ongoing project work and accounts payable and accrued liabilities also favorably changed by $9.8 million primarily related to the timing of vendor payments and increased bonus accruals based on improved operating results. This was partially offset by a $9.3 million negative impact on the comparison of cash flows in net billings in excess of cost due to the timing of customer billings and payments.

        Cash provided by operating activities during the first nine months of 2013 was $23.8 million compared with $3.4 million during 2012. The $20.4 million increase in cash provided by operations primarily relates to higher profitability in 2013 compared to 2012. In addition, accounts payable and accrued liabilities had a positive impact on the comparison of cash flows of $20.3 million primarily related to the timing of vendor payments and increased bonus accruals based on improved operating results. This was partially offset by an $11.3 million negative impact on the comparison of cash flows in net billings in excess of cost due to the timing of customer billings and payments.

        Cash Used in Investing Activities—During the third quarter of 2013, cash used in investing activities was $5.2 million compared with the third quarter of 2012 at $3.0 million. The $2.2 million increase in cash used primarily relates increased capital expenditures in the current quarter related to transportation equipment and leasehold improvements.

        Cash used in investing activities was $11.9 million for the first nine months of 2013 compared to $21.0 million during 2012. The $9.1 million decrease in cash used primarily relates to cash paid for acquisitions in 2012. This decrease was partially offset by increased capital expenditures in the current quarter related to transportation equipment and leasehold improvements.

        Cash Provided by (Used in) Financing Activities—Cash used in financing activities was $0.3 million for the third quarter of 2013 compared to $6.6 million during 2012. The most significant item affecting the comparison of our financing cash flows for these periods primarily relates to a net borrowing on the revolving line of credit in 2013 of $5.0 million compared to a net payment on the revolving line of

27

credit in 2012 of $4.0 million. The current quarter borrowing increase was offset by increases in other debt payments of $3.1 million, dividends per share of $0.2 million and share repurchases of $0.7 million.

        Cash used in financing activities was $7.4 million for the first nine months of 2013 compared to cash provided by financing activities of $2.0 million during 2012. The $9.4 million decrease in cash provided by (used in) financing activities primarily relates to $14.0 million of net borrowings on the revolving line of credit in 2012 with only $5.0 million of net borrowings in 2013.

        Free Cash Flow—We define free cash flow as cash provided by operating activities, less customary capital expenditures, plus the proceeds from asset sales. We believe free cash flow, by encompassing both profit margins and the use of working capital over our approximately one year working capital cycle, is an effective measure of operating effectiveness and efficiency. We have included free cash flow information here for this reason, and because we are often asked about it by third parties evaluating us. However, free cash flow is not considered under generally accepted accounting principles to be a primary measure of an entity's financial results, and accordingly free cash flow should not be considered an alternative to operating income, net income, or amounts shown in our consolidated statements of cash flows as determined under generally accepted accounting principles. Free cash flow may be defined differently by other companies.

Share Repurchase Program

        On March 29, 2007, our Board of Directors (the "Board") approved a stock repurchase program to acquire up to 1.0 million shares of our outstanding common stock. Subsequently, the Board has from time to time approved extensions of the program to acquire additional shares. Since the inception of the repurchase program, the Board has approved 6.6 million shares to be repurchased.

        The share repurchases will be made from time to time at our discretion in the open market or privately negotiated transactions as permitted by securities laws and other legal requirements, and subject to market conditions and other factors. The Board may modify, suspend, extend or terminate the program at any time. We repurchased 0.1 million shares during the nine months ended September 30, 2013 at an average price of $14.59 per share. Since the inception of the program in 2007 and as of September 30, 2013, we have repurchased a cumulative total of 6.0 million shares at an average price of $11.00 per share.

Debt

Revolving Credit Facility

        On June 25, 2013, we amended our senior credit facility (the "Facility") provided by a syndicate of banks increasing our borrowing capacity from $125.0 million to $175.0 million. The Facility, which is available for borrowings and letters of credit, expires in July 2018 and is secured by a first lien on substantially all of the Company's personal property except for assets related to projects subject to surety bonds and assets held by certain unrestricted subsidiaries and a second lien on the Company's assets related to projects subject to surety bonds. We incurred approximately $0.6 million in financing and professional costs in connection with the amendment to the Facility, which combined with the previous unamortized costs of $0.7 million, will be amortized on a straight-line basis as a non-cash charge to interest expense over the remaining term of the Facility. As of September 30, 2013, we had $5.0 million of outstanding borrowings, $50.7 million in letters of credit outstanding and $119.3 million of credit available.

        There are two interest rate options for borrowings under the Facility, the Base Rate Loan Option and the Eurodollar Rate Loan Option. These rates are floating rates determined by the broad financial

28

markets, meaning they can and do move up and down from time to time. Additional margins are then added to these two rates.

        The following is a summary of the additional margins:

	Consolidated Total Indebtedness to Credit Facility Adjusted EBITDA
	Less than 0.75			0.75 to 1.50			1.50 to 2.25			2.25 or greater
Additional Per Annum Interest Margin Added Under:
Base Rate Loan Option		0.25	%		0.50	%		0.75	%		1.00	%
Eurodollar Rate Loan Option		1.25	%		1.50	%		1.75	%		2.00	%

        The weighted average interest rate applicable to the borrowings under the Facility was approximately 1.4% as of September 30, 2013.

        We have used letters of credit to guarantee performance under our contracts and to ensure payment to our subcontractors and vendors under those contracts. Our lenders issue such letters of credit through the Facility for a fee. We have never had a claim made against a letter of credit that resulted in payments by a lender or by us and believe such claims are unlikely in the foreseeable future. The letter of credit fees range from 1.25% to 2.00% per annum, based on the ratio of Consolidated Total Indebtedness to Credit Facility Adjusted EBITDA, as defined in the credit agreement.

        Commitment fees are payable on the portion of the revolving loan capacity not in use for borrowings or letters of credit at any given time. These fees range from 0.20% to 0.35% per annum, based on the ratio of Consolidated Total Indebtedness to Credit Facility Adjusted EBITDA, as defined in the credit agreement.

        The Facility contains financial covenants defining various financial measures and the levels of these measures with which we must comply. Covenant compliance is assessed as of each quarter end.

        The Facility's principal financial covenants include:

        Leverage Ratio—The Facility requires that the ratio of our Consolidated Total Indebtedness to our Credit Facility Adjusted EBITDA not exceed 3.00 through December 31, 2014, 2.75 through December 31, 2015 and 2.50 through maturity. The leverage ratio as of September 30, 2013 was 0.10.

        Fixed Charge Coverage Ratio—The Facility requires that the ratio of Credit Facility Adjusted EBITDA, less non-financed capital expenditures, tax provision, dividends and amounts used to repurchase stock to the sum of interest expense and scheduled principal payments of indebtedness be at least 2.00; provided that the calculation of the fixed charge coverage ratio excludes stock repurchases and the payment of dividends at any time that the Company's Net Leverage Ratio does not exceed 1.50. The Facility also allows the fixed charge coverage ratio not to be reduced for stock repurchases through June 30, 2015 in an aggregate amount not to exceed $25 million if at the time of and after giving effect to such repurchase the Company's Net Leverage Ratio was less than or equal to 1.50. Capital expenditures, tax provision, dividends and stock repurchase payments are defined under the Facility for purposes of this covenant to be amounts for the four quarters ending as of any given quarterly covenant compliance measurement date. The fixed charge coverage ratio as of September 30, 2013 was 11.14.

        Other Restrictions—The Facility permits acquisitions of up to $20.0 million per transaction, provided that the aggregate purchase price of such an acquisition and of acquisitions in the same fiscal year does not exceed $50.0 million. However, these limitations only apply when the Company's Net Leverage Ratio is equal to or greater than 2.00.

29

        While the Facility's financial covenants do not specifically govern capacity under the Facility, if our debt level under the Facility at a quarter-end covenant compliance measurement date were to cause us to violate the Facility's leverage ratio covenant, our borrowing capacity under the Facility and the favorable terms that we currently have could be negatively impacted by the lenders.

        We are in compliance with all of our financial covenants as of September 30, 2013.

Notes to Former Owners

        We issued subordinated notes to the former owners of acquired companies as part of the consideration used to acquire these companies. These notes had an outstanding balance of $2.0 million as of September 30, 2013 and bear interest, payable annually, at a weighted average interest rate of 3.3%. The maturity date of the outstanding balance is July 2014.

Other Debt

        In conjunction with our acquisition of ColonialWebb in 2010, we acquired long-term debt related to an industrial revenue bond associated with its office building and warehouse. In July 2013, we paid the outstanding balance of $2.4 million. The weighted average interest rate on this variable rate debt as of the last day outstanding was approximately 0.21%.

        In addition, our majority owned subsidiary, EAS, has a revolving $2.5 million credit line that is available for temporary working capital needs and expires June 30, 2014. As of September 30, 2013, we had no outstanding borrowings and, therefore, $2.5 million of credit available. We estimate that the weighted average interest rate applicable to borrowings under this variable rate credit line would be approximately 2.7% as of September 30, 2013.

Outlook

        We have generated positive net free cash flow for the last fourteen calendar years, much of which occurred during challenging economic and industry conditions. We also expect to have significant borrowing capacity under our credit facility and we currently have modest indebtedness. We believe these factors will provide us with sufficient liquidity to fund our operations for the foreseeable future.

Off-Balance Sheet Arrangements and Other Commitments

        As is common in our industry, we have entered into certain off-balance sheet arrangements in the ordinary course of business that result in risks not directly reflected in our balance sheets. Our most significant off-balance sheet transactions include liabilities associated with noncancelable operating leases. We also have other off-balance sheet obligations involving letters of credit and surety guarantees.

        We enter into noncancelable operating leases for many of our facility, vehicle and equipment needs. These leases allow us to conserve cash by paying a monthly lease rental fee for use of facilities, vehicles and equipment rather than purchasing them. At the end of the lease, we have no further obligation to the lessor. If we decide to cancel or terminate a lease before the end of its term, we would typically owe the lessor the remaining lease payments under the term of the lease.

        Certain of our vendors require letters of credit to ensure reimbursement for amounts they are disbursing on our behalf, such as to beneficiaries under our self-funded insurance programs. We have also occasionally used letters of credit to guarantee performance under our contracts and to ensure payment to our subcontractors and vendors under those contracts. The letters of credit we provide are actually issued by our lenders through the Facility as described above. A letter of credit commits the lenders to pay specified amounts to the holder of the letter of credit if the holder demonstrates that we have failed to perform specified actions. If this were to occur, we would be required to reimburse the lenders. Depending on the circumstances of such a reimbursement, we may also have to record a

30

charge to earnings for the reimbursement. Absent a claim, there is no payment or reserving of funds by us in connection with a letter of credit. However, because a claim on a letter of credit would require immediate reimbursement by us to our lenders, letters of credit are treated as a use of the Facility's capacity just the same as actual borrowings. Claims against letters of credit are rare in our industry. To date we have not had a claim made against a letter of credit that resulted in payments by a lender or by us. We believe that it is unlikely that we will have to fund claims under a letter of credit in the foreseeable future.

        Many customers, particularly in connection with new construction, require us to post performance and payment bonds issued by a financial institution known as a surety. If we fail to perform under the terms of a contract or to pay subcontractors and vendors who provided goods or services under a contract, the customer may demand that the surety make payments or provide services under the bond. We must reimburse the sureties for any expenses or outlays they incur. To date, we are not aware of any losses to our sureties in connection with bonds the sureties have posted on our behalf, and we do not expect such losses to be incurred in the foreseeable future.

        Surety market conditions are currently challenging as a result of significant losses incurred by many sureties in recent periods, both in the construction industry as well as in certain larger corporate bankruptcies. As a result, less bonding capacity is available in the market and terms have become more restrictive. Further, under standard terms in the surety market, sureties issue bonds on a project-by-project basis, and can decline to issue bonds at any time. Historically, approximately 25% to 35% of our business has required bonds. While we have strong surety relationships to support our bonding needs, current market conditions as well as changes in our sureties' assessment of our operating and financial risk could cause our sureties to decline to issue bonds for our work. If that were to occur, our alternatives include doing more business that does not require bonds, posting other forms of collateral for project performance such as letters of credit or cash, and seeking bonding capacity from other sureties. We would likely also encounter concerns from customers, suppliers and other market participants as to our creditworthiness. While we believe our general operating and financial characteristics, including a significant amount of cash on our balance sheet, would enable us to ultimately respond effectively to an interruption in the availability of bonding capacity, such an interruption would likely cause our revenue and profits to decline in the near term.

Contractual Obligations

        The following recaps the future maturities of our contractual obligations as of September 30, 2013 (in thousands):

	Twelve Months Ended September 30,
	2014		2015		2016		2017		2018		Thereafter		Total
Notes to former owners	$	2,000	$	—	$	—	$	—	$	—	$	—	$	2,000
Other debt		—		—		—		—		5,000		—		5,000
Interest payable		135		70		70		70		70		—		415
Operating lease obligations		9,848		8,140		6,713		5,431		5,243		6,111		41,486
Total	$	11,983	$	8,210	$	6,783	$	5,501	$	10,313	$	6,111	$	48,901

        As of September 30, 2013, we had $50.7 million in letter of credit commitments, of which $33.9 million will expire in 2013 and $16.8 million will expire in 2014. The substantial majority of these letters of credit are posted with insurers who disburse funds on our behalf in connection with our workers' compensation, auto liability and general liability insurance program. These letters of credit provide additional security to the insurers that sufficient financial resources will be available to fund claims on our behalf, many of which develop over long periods of time, should we ever encounter financial duress. Posting of letters of credit for this purpose is a common practice for entities that manage their self-insurance programs through third-party insurers as we do. While most of these letter

31

of credit commitments expire in 2013, we expect nearly all of them, particularly those supporting our insurance programs, will be renewed annually.

        Other than the operating lease obligations noted above, we have no significant purchase or operating commitments outside of commitments to deliver equipment and provide labor in the ordinary course of performing project work.

Item 3.    Quantitative and Qualitative Disclosures about Market Risk

        We are exposed to market risk primarily related to potential adverse changes in interest rates as discussed below. We are actively involved in monitoring exposure to market risk and continue to develop and utilize appropriate risk management techniques. We are not exposed to any other significant financial market risks including commodity price risk, foreign currency exchange risk or interest rate risks from the use of derivative financial instruments. We do not use derivative financial instruments.

        We have limited exposure to changes in interest rates under our revolving credit facility and the EAS credit line. We have a debt facility under which we may borrow additional funds in the future. Our debt with fixed interest rates consists of notes to former owners of acquired companies.

        The following table presents principal amounts (stated in thousands) and related average interest rates by year of maturity for our debt obligations and their indicated fair market value at September 30, 2013:

	Twelve Months Ended September 30,
	2014			2015		2016		2017		2018		Thereafter		Fair Value
Fixed Rate Debt	$	2,000		$	—	$	—	$	—	$	—	$	—	$	2,000
Average Interest Rate		3.3	%		—		—		—		—		—		3.3	%
Variable Rate Debt	$	—		$	—	$	—	$	—	$	5,000	$	—	$	5,000

        The weighted average interest rate applicable to borrowings under the Facility was approximately 1.4% as of September 30, 2013.

        We measure certain assets at fair value on a nonrecurring basis. These assets are recognized at fair value when they are deemed to be other-than-temporarily impaired. We did not recognize any impairments on those assets required to be measured at fair value on a nonrecurring basis.

        The valuation of our contingent earn-out payments is determined using a probability weighted discounted cash flow method. This analysis reflects the contractual terms of the purchase agreements (e.g., minimum and maximum payment, length of earn-out periods, manner of calculating any amounts due, etc.) and utilizes assumptions with regard to future cash flows, probabilities of achieving such future cash flows and a discount rate.

Item 4.    Controls and Procedures

Evaluation of Disclosure Controls and Procedures

        Our executive management is responsible for ensuring the effectiveness of the design and operation of our disclosure controls and procedures. We carried out an evaluation under the supervision and with the participation of our management, including our Chief Executive Officer and Chief Financial Officer, of the effectiveness of the design and operation of our disclosure controls and procedures (as defined in Rules 13a-15(e) and 15d-15(e) under the Securities Exchange Act of 1934) as of the end of the period covered by this report. Based on that evaluation, our Chief Executive Officer and Chief Financial Officer have concluded that our disclosure controls and procedures (as defined in Rules 13a-15(e) and 15d-15(e) of the Securities Exchange Act of 1934) are effective as of the end of the period covered by this report.

Changes in Internal Control over Financial Reporting

        There have not been any changes in our internal control over financial reporting (as such term is defined in Rules 13a-15(f) and 15d-15(f) under the Securities Exchange Act of 1934) during the three months ended September 30, 2013 that have materially affected, or are reasonably likely to materially affect, our internal control over financial reporting.

32

COMFORT SYSTEMS USA, INC.
PART II—OTHER INFORMATION

Item 1.    Legal Proceedings

        We are subject to certain claims and lawsuits arising in the normal course of business. We maintain various insurance coverages to minimize financial risk associated with these claims. We have estimated and provided accruals for probable losses and related legal fees associated with certain of our litigation in our consolidated financial statements. Although management currently believes that resolving claims against us, individually or in aggregate, will not have a material adverse impact on our operating results, cash flows or financial condition, these matters are subject to inherent uncertainties and management's view of these matters may change in the future.

Item 1A.    Risk Factors

        In addition to the other information set forth in this report, you should carefully consider the factors discussed in Part 1, "Item 1A. Risk Factors" in our Annual Report on Form 10-K for the year ended December 31, 2012, which could materially affect our business, financial condition, or future results. Additional risks and uncertainties not currently known to us or that we currently deem to be immaterial also may materially adversely affect our business, financial condition, or future results.

Item 2.    Unregistered Sales of Equity Securities and Use of Proceeds

Recent Sales of Unregistered Securities

        None.

Issuer Purchases of Equity Securities

        On March 29, 2007, our Board of Directors (the "Board") approved a stock repurchase program to acquire up to 1.0 million shares of our outstanding common stock. Subsequently, the Board has from time to time approved extensions of the program to acquire additional shares. Since the inception of the repurchase program, the Board has approved 6.6 million shares to be repurchased.

        The share repurchases will be made from time to time at our discretion in the open market or privately negotiated transactions as permitted by securities laws and other legal requirements, and subject to market conditions and other factors. The Board may modify, suspend, extend or terminate the program at any time. We repurchased 0.1 million shares during the nine months ended September 30, 2013 at an average price of $14.59 per share. Since the inception of the program in 2007 and as of September 30, 2013, we have repurchased a cumulative total of 6.0 million shares at an average price of $11.00 per share.

        During the quarter ended September 30, 2013, we purchased our common shares in the following amounts at the following average prices:

Period	Total Number of Shares Purchased		Average Price Paid Per Share		Total Number of Shares Purchased as Part of Publicly Announced Plans or Programs		Maximum Number of Shares that May Yet Be Purchased Under the Plans or Programs
July 1 - July 31		—	$	—		5,941,636		658,901
August 1 - August 31		9,219	$	15.81		5,950,855		649,682
September 1 - September 30		66,359	$	15.53		6,017,214		583,323
		75,578	$	15.56		6,017,214		583,323

33

        Under our restricted share plan, employees may elect to have us withhold common shares to satisfy minimum statutory federal, state and local tax withholding obligations arising on the vesting of restricted stock awards and exercise of options. When we withhold these shares, we are required to remit to the appropriate taxing authorities the market price of the shares withheld, which could be deemed a purchase of the common shares by us on the date of withholding.

        During the three months ended September 30, 2013, we withheld common shares to satisfy these tax withholding obligations as follows:

Period	Number of Shares Purchased		Average Price Paid Per Share
July 1 - July 31		—	$	—
August 1 - August 31		—	$	—
September 1 - September 30		—	$	—
		—	$	—

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Item 6.    Exhibits

31.1	Certification of Chief Executive Officer pursuant to Section 302 of the Sarbanes-Oxley Act of 2002.
31.2	Certification of Chief Financial Officer pursuant to Section 302 of the Sarbanes-Oxley Act of 2002.
32.1	Certification of Chief Executive Officer pursuant to Section 906 of the Sarbanes-Oxley Act of 2002. (Furnished herewith, but not filed.)
32.2	Certification of Chief Financial Officer pursuant to Section 906 of the Sarbanes-Oxley Act of 2002. (Furnished herewith, but not filed.)
*101.INS	XBRL Instance Document
*101.SCH	XBRL Taxonomy Extension Schema Document
*101.CAL	XBRL Taxonomy Extension Calculation Linkbase Document
*101.DEF	XBRL Taxonomy Extension Definition Linkbase Document
*101.LAB	XBRL Taxonomy Extension Label Linkbase Document
*101.PRE	XBRL Taxonomy Extension Presentation Linkbase

*

Pursuant to Rule 406T of Regulation S-T, these interactive data files are deemed not filed or part of a registration statement or prospectus for purposes of Sections 11 and 12 of the Securities Act of 1933, are deemed not filed for purposes of Section 18 of the Securities Exchange Act of 1934 and otherwise are not subject to liability under those sections.

35

SIGNATURES

        Pursuant to the requirements of the Securities Exchange Act of 1934, the Registrant has duly caused this report to be signed on its behalf by the undersigned thereunto duly authorized.

	COMFORT SYSTEMS USA, INC.
October 30, 2013	By:	/s/ BRIAN E. LANE Brian E. Lane President, Chief Executive Officer and Director
October 30, 2013	By:	/s/ WILLIAM GEORGE William George Executive Vice President and Chief Financial Officer
October 30, 2013	By:	/s/ JULIE S. SHAEFF Julie S. Shaeff Senior Vice President and Chief Accounting Officer

36

EX-31.1

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Exhibit 31.1

CERTIFICATION OF CHIEF EXECUTIVE OFFICER
Pursuant to Section 302 of the Sarbanes Oxley Act of 2002

I, Brian E. Lane, certify that:

1.

I have reviewed this quarterly report on Form 10-Q of Comfort Systems USA, Inc.;

2.

Based on my knowledge, this report does not contain any untrue statement of a material fact or omit to state a material fact necessary to make the statements made, in light of the circumstances under which such statements were made, not misleading with respect to the period covered by this report;

3.

Based on my knowledge, the financial statements, and other financial information included in this report, fairly present in all material respects the financial condition, results of operations and cash flows of the registrant as of, and for, the periods presented in this report;

4.

The registrant's other certifying officer(s) and I are responsible for establishing and maintaining disclosure controls and procedures (as defined in Exchange Act Rules 13a-15(e) and 15d-15(e)) and internal control over financial reporting (as defined in Exchange Act Rules 13a-15(f) and 15d-15(f)) for the registrant and have:

a)

designed such disclosure controls and procedures, or caused such disclosure controls and procedures to be designed under our supervision, to ensure that material information relating to the registrant, including its consolidated subsidiaries, is made known to us by others within those entities, particularly during the period in which this report is being prepared;

b)

designed such internal control over financial reporting, or caused such internal control over financial reporting to be designed under our supervision, to provide reasonable assurance regarding the reliability of financial reporting and the preparation of financial statements for external purposes in accordance with generally accepted accounting principles;

c)

evaluated the effectiveness of the registrant's disclosure controls and procedures and presented in this report our conclusions about the effectiveness of the disclosure controls and procedures, as of the end of the period covered by this report based on such evaluation; and

d)

disclosed in this report any change in the registrant's internal control over financial reporting that occurred during the registrant's most recent fiscal quarter (the registrant's fourth fiscal quarter in the case of an annual report) that has materially affected, or is reasonably likely to materially affect, the registrant's internal control over financial reporting; and

5.

The registrant's other certifying officer(s) and I have disclosed, based on our most recent evaluation of internal control over financial reporting, to the registrant's auditors and the audit committee of the registrant's board of directors (or persons performing the equivalent functions):

a)

all significant deficiencies and material weaknesses in the design or operation of internal control over financial reporting which are reasonably likely to adversely affect the registrant's ability to record, process, summarize and report financial information; and

b)

any fraud, whether or not material, that involves management or other employees who have a significant role in the registrant's internal control over financial reporting.

Date: October 30, 2013 /s/ BRIAN E. LANE
Brian E. Lane
President and Chief Executive Officer

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Exhibit 31.1

CERTIFICATION OF CHIEF EXECUTIVE OFFICER Pursuant to Section 302 of the Sarbanes Oxley Act of 2002

EX-31.2

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Exhibit 31.2

CERTIFICATION OF CHIEF FINANCIAL OFFICER
Pursuant to Section 302 of the Sarbanes-Oxley Act of 2002

I, William George, certify that:

1.

I have reviewed this quarterly report on Form 10-Q of Comfort Systems USA, Inc.;

2.

Based on my knowledge, this report does not contain any untrue statement of a material fact or omit to state a material fact necessary to make the statements made, in light of the circumstances under which such statements were made, not misleading with respect to the period covered by this report;

3.

Based on my knowledge, the financial statements, and other financial information included in this report, fairly present in all material respects the financial condition, results of operations and cash flows of the registrant as of, and for, the periods presented in this report;

4.

The registrant's other certifying officer(s) and I are responsible for establishing and maintaining disclosure controls and procedures (as defined in Exchange Act Rules 13a-15(e) and 15d-15(e)) and internal control over financial reporting (as defined in Exchange Act Rules 13a-15(f) and 15d-15(f)) for the registrant and have:

a.

designed such disclosure controls and procedures, or caused such disclosure controls and procedures to be designed under our supervision, to ensure that material information relating to the registrant, including its consolidated subsidiaries, is made known to us by others within those entities, particularly during the period in which this report is being prepared;

b.

designed such internal control over financial reporting, or caused such internal control over financial reporting to be designed under our supervision, to provide reasonable assurance regarding the reliability of financial reporting and the preparation of financial statements for external purposes in accordance with generally accepted accounting principles;

c.

evaluated the effectiveness of the registrant's disclosure controls and procedures and presented in this report our conclusions about the effectiveness of the disclosure controls and procedures, as of the end of the period covered by this report based on such evaluation; and

d.

disclosed in this report any change in the registrant's internal control over financial reporting that occurred during the registrant's most recent fiscal quarter (the registrant's fourth fiscal quarter in the case of an annual report) that has materially affected, or is reasonably likely to materially affect, the registrant's internal control over financial reporting; and

5.

The registrant's other certifying officer(s) and I have disclosed, based on our most recent evaluation of internal control over financial reporting, to the registrant's auditors and the audit committee of the registrant's board of directors (or persons performing the equivalent functions):

a.

all significant deficiencies and material weaknesses in the design or operation of internal control over financial reporting which are reasonably likely to adversely affect the registrant's ability to record, process, summarize and report financial information; and

b.

any fraud, whether or not material, that involves management or other employees who have a significant role in the registrant's internal control over financial reporting.

Date: October 30, 2013 /s/ WILLIAM GEORGE
William George
Executive Vice President and Chief Financial Officer

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Exhibit 31.2

CERTIFICATION OF CHIEF FINANCIAL OFFICER Pursuant to Section 302 of the Sarbanes-Oxley Act of 2002

EX-32.1

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Exhibit 32.1

CERTIFICATION PURSUANT TO
18 U.S.C. SECTION 1350
AS ADOPTED PURSUANT TO
SECTION 906 OF THE SARBANES-OXLEY ACT OF 2002*

        In connection with the Quarterly Report of Comfort Systems USA, Inc. (the "Company") on Form 10-Q for the quarter ended September 30, 2013, as filed with the Securities and Exchange Commission on the date hereof (the "Report"), I, Brian E. Lane, President and Chief Executive Officer of the Company, certify, pursuant to 18 U.S.C. §1350, as adopted pursuant to Section 906 of the Sarbanes-Oxley Act of 2002, that:

1.

The Report fully complies with the requirements of Section 13(a) or 15(d), as applicable, of the Securities Exchange Act of 1934; and



2.

The information contained in the Report fairly presents, in all material respects, the financial condition and result of operations of the Company.

Date: October 30, 2013 /s/ BRIAN E. LANE
Brian E. Lane
President and Chief Executive Officer

*

A signed original of this written statement required by Section 906 has been provided to the Company and will be retained by the Company and furnished to the Securities and Exchange Commission or its staff upon request.

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Exhibit 32.1

CERTIFICATION PURSUANT TO 18 U.S.C. SECTION 1350 AS ADOPTED PURSUANT TO SECTION 906 OF THE SARBANES-OXLEY ACT OF 2002

EX-32.2

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Exhibit 32.2

CERTIFICATION PURSUANT TO
18 U.S.C. SECTION 1350
AS ADOPTED PURSUANT TO
SECTION 906 OF THE SARBANES-OXLEY ACT OF 2002*

        In connection with the Quarterly Report of Comfort Systems USA, Inc. (the "Company") on Form 10-Q for the quarter ended September 30, 2013, as filed with the Securities and Exchange Commission on the date hereof (the "Report"), I, William George, Executive Vice President and Chief Financial Officer of the Company, certify, pursuant to 18 U.S.C. §1350, as adopted pursuant to Section 906 of the Sarbanes-Oxley Act of 2002, that:

1.

The Report fully complies with the requirements of Section 13(a) or 15(d), as applicable, of the Securities Exchange Act of 1934; and



2.

The information contained in the Report fairly presents, in all material respects, the financial condition and result of operations of the Company.

Date: October 30, 2013 /s/ WILLIAM GEORGE
William George
Executive Vice President and Chief Financial Officer

*

A signed original of this written statement required by Section 906 has been provided to the Company and will be retained by the Company and furnished to the Securities and Exchange Commission or its staff upon request.

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Exhibit 32.2

CERTIFICATION PURSUANT TO 18 U.S.C. SECTION 1350 AS ADOPTED PURSUANT TO SECTION 906 OF THE SARBANES-OXLEY ACT OF 2002

XML

Summary of Significant Accounting Policies (Policies)

9 Months Ended

Sep. 30, 2013

Summary of Significant Accounting Policies

Basis of Presentation

• Basis of Presentation

        These interim statements should be read in conjunction with the historical consolidated financial statements and related notes of Comfort Systems included in the Annual Report on Form 10-K as filed with the Securities and Exchange Commission ("SEC") for the year ended December 31, 2012 (the "Form 10-K").

        The accompanying unaudited consolidated financial statements were prepared using generally accepted accounting principles for interim financial information and the instructions to Form 10-Q and applicable rules of Regulation S-X of the SEC. Accordingly, these financial statements do not include all the footnotes required by generally accepted accounting principles for complete financial statements and should be read in conjunction with the Form 10-K. We believe all adjustments necessary for a fair presentation of these interim statements have been included and are of a normal and recurring nature. The results of operations for interim periods are not necessarily indicative of the results for the full fiscal year.

Use of Estimates

• Use of Estimates

        The preparation of financial statements in conformity with generally accepted accounting principles requires the use of estimates and assumptions by management in determining the reported amounts of assets and liabilities, revenue and expenses and disclosures regarding contingent assets and liabilities. Actual results could differ from those estimates. The most significant estimates used in our financial statements affect revenue and cost recognition for construction contracts, the allowance for doubtful accounts, self-insurance accruals, deferred tax assets, warranty accruals, fair value accounting for acquisitions and the quantification of fair value for reporting units in connection with our goodwill impairment testing.

Cash Flow Information

• Cash Flow Information

        We consider all highly liquid investments purchased with an original maturity of three months or less to be cash equivalents.

        Cash paid (in thousands) for:

	Three Months Ended September 30,				Nine Months Ended September 30,
	2013		2012		2013		2012
Interest	$	269	$	320	$	789	$	984
Income taxes for continuing operations		1,928		1,578		5,051		3,107
Income taxes for discontinued operations		—		—		—		5
Total	$	2,197	$	1,898	$	5,840	$	4,096

Income Taxes

• Income Taxes

        We are subject to income tax in the United States and Puerto Rico and we file a consolidated return for federal income tax purposes. Income taxes are provided for under the liability method, which takes into account differences between financial statement treatment and tax treatment of certain transactions.

        Deferred income taxes are based on the difference between the financial reporting and tax basis of assets and liabilities. The deferred income tax provision represents the change during the reporting period in the deferred tax assets and deferred tax liabilities, net of the effect of acquisitions and dispositions. Deferred tax assets include tax loss and credit carry-forwards and are reduced by a valuation allowance if, based on available evidence, it is more likely than not that some portion or all of the deferred tax assets will not be realized.

        We regularly evaluate valuation allowances established for deferred tax assets for which future realization is uncertain. We perform this evaluation each quarter. Estimations of required valuation allowances include estimates of future taxable income. The ultimate realization of deferred tax assets is dependent upon the generation of future taxable income during the periods in which the activity underlying these assets becomes deductible. We consider projected future taxable income and tax planning strategies in making this assessment. If actual future taxable income is less than the estimates, we may not realize all or a portion of the recorded deferred tax assets.

        Significant judgment is required in assessing the timing and amounts of deductible and taxable items. We establish reserves when, despite our belief that our tax return positions are fully supportable, we believe that certain positions may be challenged and potentially disallowed. When facts and circumstances change, we adjust these reserves through our provision for income taxes.

        To the extent interest and penalties may be assessed by taxing authorities on any underpayment of income tax, such amounts have been accrued and are classified as a component of income tax expense in our consolidated statements of operations.

        For the nine months ended September 30, 2013 our tax expense is $14.4 million with an effective tax rate of 38.8% as compared to tax expense of $6.0 million with an effective tax rate of 46.5% for the nine months ended September 30, 2012. The effective rate for 2013 is higher than the federal statutory rate of 35.0% primarily due to state income taxes (3.8%). The effective rate for 2012 is higher than the federal statutory rate of 35.0% primarily due to the impact of the noncontrolling interest of EAS which for tax purposes is treated as a partnership (4.4%), state income taxes (3.2%) and an increase in tax reserves (3.1%). Tax reserves are analyzed and adjusted quarterly as events occur to warrant such changes. Adjustments to tax reserves are a component of the effective tax rate.

Financial Instruments

• Financial Instruments

        Our financial instruments consist of cash and cash equivalents, accounts receivable, other receivables, accounts payable, notes to former owners and a revolving credit facility. We believe that the carrying values of these instruments on the accompanying balance sheets approximate their fair values.

Segment Disclosure

• Segment Disclosure

        Our activities are within the mechanical services industry which is the single industry segment we serve. Each operating subsidiary represents an operating segment and these segments have been aggregated, as the operating units meet all of the aggregation criteria.

Reclassifications

• Reclassifications

        Certain reclassifications have been made in prior period financial statements to conform to current period presentation. These reclassifications are of a normal and recurring nature or are due to discontinued operations accounting related to the shutdown of our Delaware operation in 2012. Neither have resulted in any changes to previously reported net income for any periods.

Accounting Adjustment

• Accounting Adjustment

        The accompanying financial statements for the nine months ended September 30, 2013 include the correction of prior period accounting errors which resulted in additional net after-tax income in the period of approximately $1.3 million. We determined that the errors primarily impacted years prior to 2010. These corrections are reflected on a pretax basis in revenue, cost of sales and selling, general, and administrative expenses, which include $3.3 million, $0.8 million and $0.3 million, respectively.

        We have considered the guidance found in ASC 250-10 and ASC 270-10 (SEC Staff Accounting Bulletin No. 99, Materiality, Accounting Bulletin No. 108, Considering the Effects of Prior Year Misstatements when Quantifying Misstatements in Current Year Financial Statements), in evaluating whether a restatement of prior financial statements is required as a result of the misstatement to such financial statements. ASC 250 requires that corrections of errors be recorded by restatement of prior periods if the error is material. We quantitatively and qualitatively assessed the materiality of the errors and concluded that the errors were not material to our estimate of earnings for the year ended December 31, 2013, and any of our previously issued financial statements. This conclusion is based on current internal forecasts of operating results for the year ended December 31, 2013 as well as actual operating results for the years ended December 31, 2012 and 2011. Actual results for the year ended December 31, 2013 could differ from those forecasted and result in a different conclusion.

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CONSOLIDATED STATEMENTS OF OPERATIONS (USD $) In Thousands, except Per Share data, unless otherwise specified	3 Months Ended		9 Months Ended
	Sep. 30, 2013	Sep. 30, 2012	Sep. 30, 2013	Sep. 30, 2012
CONSOLIDATED STATEMENTS OF OPERATIONS
REVENUE	$ 349,989	$ 335,241	$ 1,026,932	$ 1,015,315
COST OF SERVICES	282,968	279,720	848,477	862,767
Gross profit	67,021	55,521	178,455	152,548
SELLING, GENERAL AND ADMINISTRATIVE EXPENSES	49,404	45,853	141,623	138,781
GAIN ON SALE OF ASSETS	(117)	(99)	(367)	(438)
Operating income	17,734	9,767	37,199	14,205
OTHER INCOME (EXPENSE):
Interest income	5	13	19	21
Interest expense	(347)	(406)	(1,032)	(1,231)
Changes in the fair value of contingent earn-out obligations	750	(38)	696	(105)
Other	83	13	184	82
Other income (expense)	491	(418)	(133)	(1,233)
INCOME BEFORE INCOME TAXES	18,225	9,349	37,066	12,972
INCOME TAX EXPENSE	6,588	3,926	14,366	6,031
INCOME FROM CONTINUING OPERATIONS	11,637	5,423	22,700	6,941
Loss from discontinued operations, net of income tax expense (benefit) of $(18), $77, $(57) and $37	(25)	(98)	(79)	(237)
NET INCOME INCLUDING NONCONTROLLING INTERESTS	11,612	5,325	22,621	6,704
Less: Net income (loss) attributable to noncontrolling interests	233	(348)	948	(2,408)
NET INCOME ATTRIBUTABLE TO COMFORT SYSTEMS USA, INC.	$ 11,379	$ 5,673	$ 21,673	$ 9,112
Basic-
Income from continuing operations (in dollars per share)	$ 0.31	$ 0.15	$ 0.58	$ 0.25
Net income (in dollars per share)	$ 0.31	$ 0.15	$ 0.58	$ 0.25
Diluted-
Income from continuing operations (in dollars per share)	$ 0.30	$ 0.15	$ 0.58	$ 0.25
Loss from discontinued operations (in dollars per share)				$ (0.01)
Net income (in dollars per share)	$ 0.30	$ 0.15	$ 0.58	$ 0.24
SHARES USED IN COMPUTING INCOME (LOSS) PER SHARE:
Basic (in shares)	37,293	37,155	37,184	37,126
Diluted (in shares)	37,631	37,332	37,444	37,265
DIVIDENDS PER SHARE (in dollars per share)	$ 0.055	$ 0.05	$ 0.155	$ 0.15

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Fair Value Measurements

9 Months Ended

Sep. 30, 2013

Fair Value Measurements

Fair Value Measurements

3. Fair Value Measurements

        We classify and disclose assets and liabilities carried at fair value in one of the following three categories:

• •

  Level 1—quoted prices in active markets for identical assets and liabilities;

  •

  Level 2—observable market based inputs or unobservable inputs that are corroborated by market data; and

  •

  Level 3—significant unobservable inputs in which little or no market data exists, therefore requiring an entity to develop its own assumptions.

        The following table summarizes the fair values and levels within the fair value hierarchy in which the fair value measurements fall for assets and liabilities measured on a recurring basis as of September 30, 2013 (in thousands):

			Fair Value Measurements at Reporting Date Using
	Total		Quoted Prices In Active Markets for Identical Assets (Level 1)		Significant Other Observable Inputs (Level 2)		Significant Unobservable Inputs (Level 3)
Cash and cash equivalents	$	45,305	$	45,305	$	—	$	—
Life insurance—cash surrender value	$	2,753	$	—	$	2,753	$	—
Contingent earn-out obligations	$	1,270	$	—	$	—	$	1,270

        Cash and cash equivalents consist primarily of highly rated money market funds at a variety of well-known institutions with original maturities of three months or less. The original cost of these assets approximates fair value due to their short term maturity.

        One of our operations has life insurance policies covering 40 employees with a combined face value of $40.7 million. The policies are invested in mutual funds and the fair value measurement of the cash surrender balance associated with these policies is determined using Level 2 inputs within the fair value hierarchy and will vary with investment performance. The cash surrender value of these policies is $2.8 million as of September 30, 2013 and $2.5 million as of December 31, 2012. These assets are included in "Other Noncurrent Assets" in our consolidated balance sheets.

        The valuation of our contingent earn-out obligations is determined using a probability weighted discounted cash flow method. This fair value measurement is based on significant unobservable inputs in the market and thus represents a Level 3 measurement within the fair value hierarchy. This analysis reflects the contractual terms of the purchase agreements (e.g., minimum and maximum payments, length of earn-out periods, manner of calculating any amounts due, etc.) and utilizes assumptions with regard to future cash flows, probabilities of achieving such future cash flows and a discount rate. The contingent earn-out obligations are measured at fair value each reporting period and changes in estimates of fair value are recognized in earnings.

        The table below presents a reconciliation of the fair value of our contingent earn-out obligations that use significant unobservable inputs (Level 3) (in thousands).

Balance at beginning of year	$	1,966
Issuances		—
Settlements		—
Adjustments to fair value		(696	)
Balance at end of period	$	1,270

        We measure certain assets at fair value on a nonrecurring basis. These assets are recognized at fair value when they are deemed to be other-than-temporarily impaired. We did not recognize any impairments, in the current quarter, on those assets required to be measured at fair value on a nonrecurring basis.

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Business and Organization (Details)	9 Months Ended
	Sep. 30, 2013
Installation of systems in newly constructed facilities
Business and Organization
Percentage of revenue attributable to services	43.00%
Maintenance, repair and replacement services
Business and Organization
Percentage of revenue attributable to services	57.00%
HVAC
Business and Organization
Percentage of revenue attributable to services	75.00%
Plumbing
Business and Organization
Percentage of revenue attributable to services	15.00%
Building automation control systems
Business and Organization
Percentage of revenue attributable to services	6.00%
Other
Business and Organization
Percentage of revenue attributable to services	4.00%

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Summary of Significant Accounting Policies (Tables)

9 Months Ended

Sep. 30, 2013

Summary of Significant Accounting Policies

Schedule of cash paid

     Cash paid (in thousands) for:

	Three Months Ended September 30,				Nine Months Ended September 30,
	2013		2012		2013		2012
Interest	$	269	$	320	$	789	$	984
Income taxes for continuing operations		1,928		1,578		5,051		3,107
Income taxes for discontinued operations		—		—		—		5
Total	$	2,197	$	1,898	$	5,840	$	4,096

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Fair Value Measurements (Details) (USD $)			9 Months Ended
	Sep. 30, 2013 item	Dec. 31, 2012	Sep. 30, 2013 Contingent earn-out obligations	Sep. 30, 2013 Recurring basis Total	Sep. 30, 2013 Recurring basis Quoted Market Prices In Active Markets for Identical Assets (Level 1)	Sep. 30, 2013 Recurring basis Significant Other Observable Inputs (Level 2)	Sep. 30, 2013 Recurring basis Significant Unobservable Inputs (Level 3)
Fair Value Measurements
Cash and cash equivalents				$ 45,305,000	$ 45,305,000
Life insurance - cash surrender value				2,753,000		2,753,000
Contingent earn-out obligations				1,270,000			1,270,000
Number of employees covered under life insurance policies	40
Combined face value of life insurance policies	40,700,000
Cash surrender value	2,800,000	2,500,000
Reconciliation of the fair value of contingent earn-out obligations that use significant unobservable inputs (Level 3)
Balance at beginning of year			1,966,000
Adjustments to fair value			(696,000)
Balance at end of period			$ 1,270,000

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Summary of Significant Accounting Policies (Details 2) (USD $) In Thousands, unless otherwise specified	3 Months Ended		9 Months Ended
	Sep. 30, 2013	Sep. 30, 2012	Sep. 30, 2013	Sep. 30, 2012
Net income after-tax	$ 11,379	$ 5,673	$ 21,673	$ 9,112
Revenue	349,989	335,241	1,026,932	1,015,315
Cost of sales	282,968	279,720	848,477	862,767
Selling, general, and administrative expenses	49,404	45,853	141,623	138,781
Adjustments
Net income after-tax			1,300
Revenue			3,300
Cost of sales			800
Selling, general, and administrative expenses			$ 300

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Stockholders' Equity (Details) (Stock Options) In Millions, unless otherwise specified	3 Months Ended		9 Months Ended
	Sep. 30, 2013	Sep. 30, 2012	Sep. 30, 2013	Sep. 30, 2012
Stock Options
Earnings Per Share
Anti-dilutive securities excluded from computation of earnings per share amount (in shares)	0	1.0	0	1.0

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Goodwill and Identifiable Intangible Assets, Net (Details 2) (USD $) In Thousands, unless otherwise specified					9 Months Ended				9 Months Ended				9 Months Ended				9 Months Ended
	Sep. 30, 2013	Dec. 31, 2012	Sep. 30, 2013 Customer relationships	Dec. 31, 2012 Customer relationships	Sep. 30, 2013 Customer relationships Minimum	Sep. 30, 2013 Customer relationships Maximum	Sep. 30, 2013 Backlog	Dec. 31, 2012 Backlog	Sep. 30, 2013 Backlog Minimum	Sep. 30, 2013 Backlog Maximum	Sep. 30, 2013 Noncompete agreements	Dec. 31, 2012 Noncompete agreements	Sep. 30, 2013 Noncompete agreements Minimum	Sep. 30, 2013 Noncompete agreements Maximum	Sep. 30, 2013 Tradenames	Dec. 31, 2012 Tradenames	Sep. 30, 2013 Tradenames Minimum	Sep. 30, 2013 Tradenames Maximum
Identifiable Intangible Assets, Net
Estimated Useful Lives in Years					1 year	15 years			1 year	2 years			2 years	7 years			2 years	25 years
Gross Book Value	$ 73,504	$ 73,504	$ 40,404	$ 40,404			$ 6,515	$ 6,515			$ 2,890	$ 2,890			$ 23,695	$ 23,695
Accumulated Amortization	$ (34,397)	$ (28,989)	$ (19,639)	$ (15,579)			$ (6,515)	$ (6,375)			$ (2,594)	$ (2,380)			$ (5,649)	$ (4,655)

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Summary of Significant Accounting Policies (Details) (USD $) In Thousands, unless otherwise specified	3 Months Ended		9 Months Ended
	Sep. 30, 2013	Sep. 30, 2012	Sep. 30, 2013	Sep. 30, 2012
Cash paid for:
Interest	$ 269	$ 320	$ 789	$ 984
Income taxes for continuing operations	1,928	1,578	5,051	3,107
Income taxes for discontinued operations				5
Total	2,197	1,898	5,840	4,096
Income Taxes
Tax expense	$ 6,588	$ 3,926	$ 14,366	$ 6,031
Effective tax rate (as a percent)			38.80%	46.50%
Federal statutory income taxes rate (as a percent)			35.00%	35.00%
State income taxes rate (as a percent)			(3.80%)	(3.20%)
Income attributable to noncontrolling interest (as a percent)				(4.40%)
Tax reserves (as a percent)				(3.10%)

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CONSOLIDATED STATEMENTS OF STOCKHOLDERS' EQUITY (USD $) In Thousands, except Share data, unless otherwise specified	Total	Common Stock	Treasury Stock	Additional Paid-In Capital	Retained Earnings (Deficit)	Non-Controlling Interests
BALANCE at Dec. 31, 2011	$ 283,106	$ 411	$ (39,437)	$ 323,608	$ (19,991)	$ 18,515
BALANCE (in shares) at Dec. 31, 2011		41,123,365	(3,714,506)
Increase (Decrease) in Stockholders' Equity
Net income (loss)	11,849				13,463	(1,614)
Issuance of Stock:
Issuance of shares for options exercised including tax benefit	373		1,087	(714)
Issuance of shares for options exercised including tax benefit (in shares)			102,750
Issuance of restricted stock			742	(742)
Issuance of restricted stock (in shares)			70,000
Shares received in lieu of tax withholding payment on vested restricted stock	(544)		(544)
Shares received in lieu of tax withholding payment on vested restricted stock (in shares)			(51,507)
Tax benefit from vesting of restricted stock	56			56
Stock-based compensation	2,797			2,797
Dividends	(7,471)			(7,471)
Share repurchase	(2,860)		(2,860)
Share repurchase (in shares)			(286,036)
BALANCE at Dec. 31, 2012	287,306	411	(41,012)	317,534	(6,528)	16,901
BALANCE (in shares) at Dec. 31, 2012		41,123,365	(3,879,299)
Increase (Decrease) in Stockholders' Equity
Net income (loss)	22,621				21,673	948
Issuance of Stock:
Issuance of shares for options exercised including tax benefit	1,672		1,701	(29)
Issuance of shares for options exercised including tax benefit (in shares)			159,461
Issuance of restricted stock			1,301	(1,301)
Issuance of restricted stock (in shares)			122,375
Shares received in lieu of tax withholding payment on vested restricted stock	(614)		(614)
Shares received in lieu of tax withholding payment on vested restricted stock (in shares)			(44,384)
Tax benefit from vesting of restricted stock	172			172
Forfeiture of unvested restricted stock			(5)	5
Forfeiture of unvested restricted stock (in shares)			(469)
Stock-based compensation	2,665			2,665
Dividends	(5,777)			(1,862)	(3,915)
Share repurchase	(1,832)		(1,832)
Share repurchase (in shares)	(100,000)		(125,541)
BALANCE at Sep. 30, 2013	$ 306,213	$ 411	$ (40,461)	$ 317,184	$ 11,230	$ 17,849
BALANCE (in shares) at Sep. 30, 2013		41,123,365	(3,767,857)

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Business and Organization

9 Months Ended

Sep. 30, 2013

Business and Organization

Business and Organization

1. Business and Organization

        Comfort Systems USA, Inc., a Delaware corporation, provides comprehensive heating, ventilation and air conditioning ("HVAC") installation, maintenance, repair and replacement services within the mechanical services industry. We operate primarily in the commercial, industrial and institutional HVAC markets and perform most of our services within office buildings, retail centers, apartment complexes, manufacturing plants and healthcare, education and government facilities. In addition to standard HVAC services, we provide specialized applications such as building automation control systems, fire protection, process cooling, electronic monitoring and process piping. Certain locations also perform related activities such as electrical service and plumbing. Approximately 43% of our consolidated 2013 revenue is attributable to installation of systems in newly constructed facilities, with the remaining 57% attributable to maintenance, repair and replacement services. The following service activities account for our consolidated 2013 revenue: HVAC 75%, plumbing 15%, building automation control systems 6% and other 4%. These service activities are within the mechanical services industry which is the single industry segment we serve.

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Acquisitions

9 Months Ended

Sep. 30, 2013

Acquisitions

Acquisitions

4. Acquisitions

        No acquisitions were completed in the first nine months of 2013. We completed one acquisition in the first quarter and two in the second quarter of 2012. These acquisitions were not material, individually or in the aggregate, and were "tucked-in" with existing operations. The results of operations of acquisitions are included in our consolidated financial statements from their respective acquisition dates. Additional contingent purchase price ("earn-out") has been or will be paid if certain acquisitions achieve predetermined profitability targets.

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Summary of Significant Accounting Policies

9 Months Ended

Sep. 30, 2013

Summary of Significant Accounting Policies

Summary of Significant Accounting Policies

2. Summary of Significant Accounting Policies

• Basis of Presentation

        These interim statements should be read in conjunction with the historical consolidated financial statements and related notes of Comfort Systems included in the Annual Report on Form 10-K as filed with the Securities and Exchange Commission ("SEC") for the year ended December 31, 2012 (the "Form 10-K").

        The accompanying unaudited consolidated financial statements were prepared using generally accepted accounting principles for interim financial information and the instructions to Form 10-Q and applicable rules of Regulation S-X of the SEC. Accordingly, these financial statements do not include all the footnotes required by generally accepted accounting principles for complete financial statements and should be read in conjunction with the Form 10-K. We believe all adjustments necessary for a fair presentation of these interim statements have been included and are of a normal and recurring nature. The results of operations for interim periods are not necessarily indicative of the results for the full fiscal year.

• Use of Estimates

        The preparation of financial statements in conformity with generally accepted accounting principles requires the use of estimates and assumptions by management in determining the reported amounts of assets and liabilities, revenue and expenses and disclosures regarding contingent assets and liabilities. Actual results could differ from those estimates. The most significant estimates used in our financial statements affect revenue and cost recognition for construction contracts, the allowance for doubtful accounts, self-insurance accruals, deferred tax assets, warranty accruals, fair value accounting for acquisitions and the quantification of fair value for reporting units in connection with our goodwill impairment testing.

• Cash Flow Information

        We consider all highly liquid investments purchased with an original maturity of three months or less to be cash equivalents.

        Cash paid (in thousands) for:

	Three Months Ended September 30,				Nine Months Ended September 30,
	2013		2012		2013		2012
Interest	$	269	$	320	$	789	$	984
Income taxes for continuing operations		1,928		1,578		5,051		3,107
Income taxes for discontinued operations		—		—		—		5
Total	$	2,197	$	1,898	$	5,840	$	4,096

• Income Taxes

        We are subject to income tax in the United States and Puerto Rico and we file a consolidated return for federal income tax purposes. Income taxes are provided for under the liability method, which takes into account differences between financial statement treatment and tax treatment of certain transactions.

        Deferred income taxes are based on the difference between the financial reporting and tax basis of assets and liabilities. The deferred income tax provision represents the change during the reporting period in the deferred tax assets and deferred tax liabilities, net of the effect of acquisitions and dispositions. Deferred tax assets include tax loss and credit carry-forwards and are reduced by a valuation allowance if, based on available evidence, it is more likely than not that some portion or all of the deferred tax assets will not be realized.

        We regularly evaluate valuation allowances established for deferred tax assets for which future realization is uncertain. We perform this evaluation each quarter. Estimations of required valuation allowances include estimates of future taxable income. The ultimate realization of deferred tax assets is dependent upon the generation of future taxable income during the periods in which the activity underlying these assets becomes deductible. We consider projected future taxable income and tax planning strategies in making this assessment. If actual future taxable income is less than the estimates, we may not realize all or a portion of the recorded deferred tax assets.

        Significant judgment is required in assessing the timing and amounts of deductible and taxable items. We establish reserves when, despite our belief that our tax return positions are fully supportable, we believe that certain positions may be challenged and potentially disallowed. When facts and circumstances change, we adjust these reserves through our provision for income taxes.

        To the extent interest and penalties may be assessed by taxing authorities on any underpayment of income tax, such amounts have been accrued and are classified as a component of income tax expense in our consolidated statements of operations.

        For the nine months ended September 30, 2013 our tax expense is $14.4 million with an effective tax rate of 38.8% as compared to tax expense of $6.0 million with an effective tax rate of 46.5% for the nine months ended September 30, 2012. The effective rate for 2013 is higher than the federal statutory rate of 35.0% primarily due to state income taxes (3.8%). The effective rate for 2012 is higher than the federal statutory rate of 35.0% primarily due to the impact of the noncontrolling interest of EAS which for tax purposes is treated as a partnership (4.4%), state income taxes (3.2%) and an increase in tax reserves (3.1%). Tax reserves are analyzed and adjusted quarterly as events occur to warrant such changes. Adjustments to tax reserves are a component of the effective tax rate.

• Financial Instruments

        Our financial instruments consist of cash and cash equivalents, accounts receivable, other receivables, accounts payable, notes to former owners and a revolving credit facility. We believe that the carrying values of these instruments on the accompanying balance sheets approximate their fair values.

• Segment Disclosure

        Our activities are within the mechanical services industry which is the single industry segment we serve. Each operating subsidiary represents an operating segment and these segments have been aggregated, as the operating units meet all of the aggregation criteria.

• Reclassifications

        Certain reclassifications have been made in prior period financial statements to conform to current period presentation. These reclassifications are of a normal and recurring nature or are due to discontinued operations accounting related to the shutdown of our Delaware operation in 2012. Neither have resulted in any changes to previously reported net income for any periods.

• Accounting Adjustment

        The accompanying financial statements for the nine months ended September 30, 2013 include the correction of prior period accounting errors which resulted in additional net after-tax income in the period of approximately $1.3 million. We determined that the errors primarily impacted years prior to 2010. These corrections are reflected on a pretax basis in revenue, cost of sales and selling, general, and administrative expenses, which include $3.3 million, $0.8 million and $0.3 million, respectively.

        We have considered the guidance found in ASC 250-10 and ASC 270-10 (SEC Staff Accounting Bulletin No. 99, Materiality, Accounting Bulletin No. 108, Considering the Effects of Prior Year Misstatements when Quantifying Misstatements in Current Year Financial Statements), in evaluating whether a restatement of prior financial statements is required as a result of the misstatement to such financial statements. ASC 250 requires that corrections of errors be recorded by restatement of prior periods if the error is material. We quantitatively and qualitatively assessed the materiality of the errors and concluded that the errors were not material to our estimate of earnings for the year ended December 31, 2013, and any of our previously issued financial statements. This conclusion is based on current internal forecasts of operating results for the year ended December 31, 2013 as well as actual operating results for the years ended December 31, 2012 and 2011. Actual results for the year ended December 31, 2013 could differ from those forecasted and result in a different conclusion.

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Acquisitions (Details)	3 Months Ended		9 Months Ended
	Jun. 30, 2012 item	Mar. 31, 2012 item	Sep. 30, 2013 item
Acquisitions
Number of acquisitions	2	1	0

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Long-Term Debt Obligations (Details) (USD $)	3 Months Ended		9 Months Ended			9 Months Ended					9 Months Ended			9 Months Ended					9 Months Ended									1 Months Ended
	Sep. 30, 2013	Sep. 30, 2012	Sep. 30, 2013	Sep. 30, 2012	Dec. 31, 2012	Sep. 30, 2013 Revolving credit facility item	Jun. 25, 2013 Revolving credit facility	Jun. 24, 2013 Revolving credit facility	Sep. 30, 2013 Revolving credit facility EAS	Sep. 30, 2013 Revolving credit facility Actual	Sep. 30, 2013 Revolving credit facility Minimum	Sep. 30, 2013 Revolving credit facility Minimum Covenant Requirement	Sep. 30, 2013 Revolving credit facility Minimum Actual	Sep. 30, 2013 Revolving credit facility Maximum	Sep. 30, 2013 Revolving credit facility Maximum Through December 31, 2014	Sep. 30, 2013 Revolving credit facility Maximum Through December 31, 2015	Sep. 30, 2013 Revolving credit facility Maximum Through maturity	Sep. 30, 2013 Revolving credit facility Maximum Covenant Requirement	Sep. 30, 2013 Revolving credit facility Maximum Actual	Sep. 30, 2013 Revolving credit facility Base rate Consolidated Total Indebtedness to Credit Facility Adjusted EBITDA: Less than 0.75	Sep. 30, 2013 Revolving credit facility Base rate Consolidated Total Indebtedness to Credit Facility Adjusted EBITDA: 0.75 to 1.50	Sep. 30, 2013 Revolving credit facility Base rate Consolidated Total Indebtedness to Credit Facility Adjusted EBITDA: 1.50 to 2.25	Sep. 30, 2013 Revolving credit facility Base rate Consolidated Total Indebtedness to Credit Facility Adjusted EBITDA: 2.25 or greater	Sep. 30, 2013 Revolving credit facility Eurodollar rate Consolidated Total Indebtedness to Credit Facility Adjusted EBITDA: Less than 0.75	Sep. 30, 2013 Revolving credit facility Eurodollar rate Consolidated Total Indebtedness to Credit Facility Adjusted EBITDA: 0.75 to 1.50	Sep. 30, 2013 Revolving credit facility Eurodollar rate Consolidated Total Indebtedness to Credit Facility Adjusted EBITDA: 1.50 to 2.25	Sep. 30, 2013 Revolving credit facility Eurodollar rate Consolidated Total Indebtedness to Credit Facility Adjusted EBITDA: 2.25 or greater	Jul. 31, 2013 Other debt	Sep. 30, 2013 Other debt	Dec. 31, 2012 Other debt	Sep. 30, 2013 Notes to former owners	Dec. 31, 2012 Notes to former owners
Long-Term Debt Obligations
Total debt	$ 7,000,000		$ 7,000,000		$ 7,400,000	$ 5,000,000																								$ 2,400,000	$ 2,000,000	$ 5,000,000
Less - current portion	(2,000,000)		(2,000,000)		(300,000)
Total long-term portion of debt	5,000,000		5,000,000		7,100,000
Borrowing capacity							175,000,000	125,000,000	2,500,000
Financing and professional cost							600,000
Unamortized costs							700,000
Outstanding borrowings						5,000,000
Letters of credit amount outstanding						50,700,000
Credit available						119,300,000			2,500,000
Number of interest rate options						2
Additional per annum interest margin added under:
Variable rate basis																				Base rate	Base rate	Base rate	Base rate	Eurodollar rate	Eurodollar rate	Eurodollar rate	Eurodollar rate
Additional per annum interest margin (as a percent)																				0.25%	0.50%	0.75%	1.00%	1.25%	1.50%	1.75%	2.00%
Weighted average interest rate (as a percent)						1.40%			2.70%																				0.21%		3.30%
Payments of debt	3,400,000	300,000	5,400,000	4,400,000																								2,400,000
Letter of credit fees (as a percent)											1.25%			2.00%
Commitment fees payable on unused portion of the facility (as a percent)											0.20%			0.35%
Principal financial covenants
Leverage ratio						0.10									3.00	2.75	2.50
Net leverage ratio used to determine exclusion of stock repurchases and the payment of dividends for calculation of the fixed charge coverage ratio																		1.50
Amount of stock repurchases to maintain maximum net leverage ratio																			25,000,000
Net leverage ratio after giving effect to stock repurchases for calculation of the fixed charge coverage ratio																			1.50
Number of quarters of capital expenditures, tax provision, dividends and stock repurchase payments used for calculation of fixed charge coverage ratio						4
Fixed charge coverage ratio										11.14			2.00
Permitted amount of acquisitions per transaction														20,000,000
Aggregate purchase price of current acquisition and acquisitions in the preceding 12 month period for determining permitted amount of acquisition per transaction														$ 50,000,000
Net leverage ratio used as basis for other restrictions												2.00

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CONSOLIDATED BALANCE SHEETS (Parenthetical) (USD $) In Thousands, except Share data, unless otherwise specified	Sep. 30, 2013	Dec. 31, 2012
CONSOLIDATED BALANCE SHEETS
Accounts receivable, allowance for doubtful accounts (in dollars)	$ 4,398	$ 6,333
Preferred stock, par value (in dollars per share)	$ 0.01	$ 0.01
Preferred stock, shares authorized	5,000,000	5,000,000
Preferred stock, shares issued	0	0
Preferred stock, shares outstanding	0	0
Common stock, par value (in dollars per share)	$ 0.01	$ 0.01
Common stock, shares authorized	102,969,912	102,969,912
Common stock, shares issued	41,123,365	41,123,365
Treasury stock, shares	3,767,857	3,879,299

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Long-Term Debt Obligations

9 Months Ended

Sep. 30, 2013

Long-Term Debt Obligations

Long-Term Debt Obligations

7. Long-Term Debt Obligations

        Long-term debt obligations consist of the following (in thousands):

	September 30, 2013			December 31, 2012
Revolving credit facility	$	5,000		$	—
Other debt		—			2,400
Notes to former owners		2,000			5,000
Total debt		7,000			7,400
Less—current portion		(2,000	)		(300	)
Total long-term portion of debt	$	5,000		$	7,100

• Revolving Credit Facility

        On June 25, 2013, we amended our senior credit facility (the "Facility") provided by a syndicate of banks increasing our borrowing capacity from $125.0 million to $175.0 million. The Facility, which is available for borrowings and letters of credit, expires in July 2018 and is secured by a first lien on substantially all of the Company's personal property except for assets related to projects subject to surety bonds and assets held by certain unrestricted subsidiaries and a second lien on the Company's assets related to projects subject to surety bonds. We incurred approximately $0.6 million in financing and professional costs in connection with the amendment to the Facility, which combined with the previous unamortized costs of $0.7 million, will be amortized on a straight-line basis as a non-cash charge to interest expense over the remaining term of the Facility. As of September 30, 2013, we had $5.0 million of outstanding borrowings, $50.7 million in letters of credit outstanding and $119.3 million of credit available.

        There are two interest rate options for borrowings under the Facility, the Base Rate Loan Option and the Eurodollar Rate Loan Option. These rates are floating rates determined by the broad financial markets, meaning they can and do move up and down from time to time. Additional margins are then added to these two rates.

        The following is a summary of the additional margins:

	Consolidated Total Indebtedness to Credit Facility Adjusted EBITDA
	Less than 0.75			0.75 to 1.50			1.50 to 2.25			2.25 or greater
Additional Per Annum Interest Margin Added Under:
Base Rate Loan Option		0.25	%		0.50	%		0.75	%		1.00	%
Eurodollar Rate Loan Option		1.25	%		1.50	%		1.75	%		2.00	%

        The weighted average interest rate applicable to the borrowings under the Facility was approximately 1.4% as of September 30, 2013.

        We have used letters of credit to guarantee performance under our contracts and to ensure payment to our subcontractors and vendors under those contracts. Our lenders issue such letters of credit through the Facility for a fee. We have never had a claim made against a letter of credit that resulted in payments by a lender or by us and believe such claims are unlikely in the foreseeable future. The letter of credit fees range from 1.25% to 2.00% per annum, based on the ratio of Consolidated Total Indebtedness to Credit Facility Adjusted EBITDA, as defined in the credit agreement.

        Commitment fees are payable on the portion of the revolving loan capacity not in use for borrowings or letters of credit at any given time. These fees range from 0.20% to 0.35% per annum, based on the ratio of Consolidated Total Indebtedness to Credit Facility Adjusted EBITDA, as defined in the credit agreement.

        The Facility contains financial covenants defining various financial measures and the levels of these measures with which we must comply. Covenant compliance is assessed as of each quarter end.

        The Facility's principal financial covenants include:

        Leverage Ratio—The Facility requires that the ratio of our Consolidated Total Indebtedness to our Credit Facility Adjusted EBITDA not exceed 3.00 through December 31, 2014, 2.75 through December 31, 2015 and 2.50 through maturity. The leverage ratio as of September 30, 2013 was 0.10.

        Fixed Charge Coverage Ratio—The Facility requires that the ratio of Credit Facility Adjusted EBITDA, less non-financed capital expenditures, tax provision, dividends and amounts used to repurchase stock to the sum of interest expense and scheduled principal payments of indebtedness be at least 2.00; provided that the calculation of the fixed charge coverage ratio excludes stock repurchases and the payment of dividends at any time that the Company's Net Leverage Ratio does not exceed 1.50. The Facility also allows the fixed charge coverage ratio not to be reduced for stock repurchases through June 30, 2015 in an aggregate amount not to exceed $25 million if at the time of and after giving effect to such repurchase the Company's Net Leverage Ratio was less than or equal to 1.50. Capital expenditures, tax provision, dividends and stock repurchase payments are defined under the Facility for purposes of this covenant to be amounts for the four quarters ending as of any given quarterly covenant compliance measurement date. The fixed charge coverage ratio as of September 30, 2013 was 11.14.

        Other Restrictions—The Facility permits acquisitions of up to $20.0 million per transaction, provided that the aggregate purchase price of such an acquisition and of acquisitions in the same fiscal year does not exceed $50.0 million. However, these limitations only apply when the Company's Net Leverage Ratio is equal to or greater than 2.00.

        While the Facility's financial covenants do not specifically govern capacity under the Facility, if our debt level under the Facility at a quarter-end covenant compliance measurement date were to cause us to violate the Facility's leverage ratio covenant, our borrowing capacity under the Facility and the favorable terms that we currently have could be negatively impacted by the lenders.

        We are in compliance with all of our financial covenants as of September 30, 2013.

• Notes to Former Owners

        We issued subordinated notes to the former owners of acquired companies as part of the consideration used to acquire these companies. These notes had an outstanding balance of $2.0 million as of September 30, 2013 and bear interest, payable annually, at a weighted average interest rate of 3.3%. The maturity date of the outstanding balance is July 2014.

• Other Debt

        In conjunction with our acquisition of ColonialWebb in 2010, we acquired long-term debt related to an industrial revenue bond associated with its office building and warehouse. In July 2013, we paid the outstanding balance of $2.4 million. The weighted average interest rate on this variable rate debt as of the last day outstanding was approximately 0.21%.

        In addition, our majority owned subsidiary, EAS, has a revolving $2.5 million credit line that is available for temporary working capital needs and expires June 30, 2014. As of September 30, 2013, we had no outstanding borrowings and, therefore, $2.5 million of credit available. We estimate that the weighted average interest rate applicable to borrowings under this variable rate credit line would be approximately 2.7% as of September 30, 2013.

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CONSOLIDATED STATEMENTS OF OPERATIONS (Parenthetical) (USD $) In Thousands, unless otherwise specified	3 Months Ended		9 Months Ended
	Sep. 30, 2013	Sep. 30, 2012	Sep. 30, 2013	Sep. 30, 2012
CONSOLIDATED STATEMENTS OF OPERATIONS
Income taxes - discontinued operation	$ (18)	$ 77	$ (57)	$ 37

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CONSOLIDATED BALANCE SHEETS (USD $) In Thousands, unless otherwise specified	Sep. 30, 2013	Dec. 31, 2012
CURRENT ASSETS:
Cash and cash equivalents	$ 45,305	$ 40,757
Accounts receivable, less allowance for doubtful accounts of $4,398 and $6,333, respectively	270,612	256,959
Other receivables	7,947	12,376
Inventories	9,336	9,638
Prepaid expenses and other	25,529	25,037
Costs and estimated earnings in excess of billings	30,200	26,204
Assets related to discontinued operations	297	1,582
Total current assets	389,226	372,553
PROPERTY AND EQUIPMENT, NET	44,943	41,416
GOODWILL	114,588	114,588
IDENTIFIABLE INTANGIBLE ASSETS, NET	39,107	44,515
OTHER NONCURRENT ASSETS	6,590	7,682
Total assets	594,454	580,754
CURRENT LIABILITIES:
Current maturities of long-term debt		300
Current maturities of notes to former owners	2,000
Accounts payable	95,667	100,641
Accrued compensation and benefits	44,185	36,892
Billings in excess of costs and estimated earnings	62,566	73,814
Accrued self-insurance expense	29,930	29,096
Other current liabilities	32,213	27,077
Liabilities related to discontinued operations	88	767
Total current liabilities	266,649	268,587
LONG-TERM DEBT, NET OF CURRENT MATURITIES	5,000	2,100
NOTES TO FORMER OWNERS, NET OF CURRENT MATURITIES		5,000
DEFERRED INCOME TAX LIABILITIES	8,596	7,954
OTHER LONG-TERM LIABILITIES	7,996	9,807
Total liabilities	288,241	293,448
COMMITMENTS AND CONTINGENCIES
STOCKHOLDERS' EQUITY:
Preferred stock, $.01 par, 5,000,000 shares authorized, none issued and outstanding
Common stock, $.01 par, 102,969,912 shares authorized, 41,123,365 and 41,123,365 shares issued, respectively	411	411
Treasury stock, at cost, 3,767,857 and 3,879,299 shares, respectively	(40,461)	(41,012)
Additional paid-in capital	317,184	317,534
Retained earnings (deficit)	11,230	(6,528)
Comfort Systems USA, Inc. stockholders' equity	288,364	270,405
Noncontrolling interests	17,849	16,901
Total stockholders' equity	306,213	287,306
Total liabilities and stockholders' equity	$ 594,454	$ 580,754

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Discontinued Operations (Details) (USD $)	3 Months Ended		9 Months Ended
	Sep. 30, 2013	Sep. 30, 2012	Sep. 30, 2013	Sep. 30, 2012
Discontinued Operations
Interest expense allocated to discontinued operations			$ 0
Revenue and pre-tax loss related to discontinued operations
Revenue		299,000	22,000	4,385,000
Pre-tax loss	(43,000)	(21,000)	(136,000)	(200,000)
Operation located in Delaware
Discontinued Operations
After-tax loss from discontinued operations		100,000	100,000	200,000
Operation located in Delaware | Maximum
Discontinued Operations
After-tax loss from discontinued operations	$ 100,000

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Stockholders' Equity (Tables)

9 Months Ended

Sep. 30, 2013

Stockholders' Equity

Reconciliation of number of shares outstanding with the number of shares used in computing basic and diluted earnings per share

The following table reconciles the number of shares outstanding with the number of shares used in computing basic and diluted earnings per share for each of the periods presented (in thousands):

	Three Months Ended September 30,					Nine Months Ended September 30,
	2013			2012		2013			2012
Common shares outstanding, end of period(a)		37,296			37,125		37,296			37,125
Effect of using weighted average common shares outstanding		(3	)		30		(112	)		1
Shares used in computing earnings per share—basic		37,293			37,155		37,184			37,126
Effect of shares issuable under stock option plans based on the treasury stock method		245			90		153			91
Effect of contingently issuable restricted shares		93			87		107			48
Shares used in computing earnings per share—diluted		37,631			37,332		37,444			37,265

(a)

Excludes 0.1 million and 0.2 million shares of unvested contingently issuable restricted stock outstanding as of September 30, 2013 and 2012, respectively.

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Stockholders' Equity (Details 2) (USD $)	3 Months Ended		9 Months Ended		79 Months Ended
	Sep. 30, 2013	Sep. 30, 2012	Sep. 30, 2013	Sep. 30, 2012	Sep. 30, 2013	Mar. 29, 2007
Reconciliation of the number of shares outstanding with the number of shares used in computing basic and diluted earnings per share
Common shares outstanding, end of period	37,296,000	37,125,000	37,296,000	37,125,000
Effect of using weighted average common shares outstanding	(3,000)	30,000	(112,000)	1,000
Shares used in computing earnings per share - basic	37,293,000	37,155,000	37,184,000	37,126,000
Effect of shares issuable under stock option plans based on the treasury stock method	245,000	90,000	153,000	91,000
Effect of contingently issuable restricted shares	93,000	87,000	107,000	48,000
Shares used in computing earnings per share - diluted	37,631,000	37,332,000	37,444,000	37,265,000
Number of shares of unvested contingently issuable restricted stock outstanding	100,000	200,000	100,000	200,000	100,000
Share Repurchase Program
Number of shares of outstanding common stock authorized to be acquired under a stock repurchase program	6,600,000		6,600,000		6,600,000	1,000,000
Number of shares of common stock repurchased			100,000		6,000,000
Average price (in dollars per share)			$ 14.59		$ 11.00

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Goodwill and Identifiable Intangible Assets, Net

9 Months Ended

Sep. 30, 2013

Goodwill and Identifiable Intangible Assets, Net

Goodwill and Identifiable Intangible Assets, Net

6. Goodwill and Identifiable Intangible Assets, Net

• Goodwill

        The changes in the carrying amount of goodwill are as follows (in thousands):

	September 30, 2013		December 31, 2012
Balance at beginning of year	$	114,588	$	107,093
Additions		—		7,495
Balance at end of period	$	114,588	$	114,588

• Identifiable Intangible Assets, Net

        Identifiable intangible assets consist of the following (dollars in thousands):

		September 30, 2013					December 31, 2012
	Estimated Useful Lives in Years	Gross Book Value		Accumulated Amortization			Gross Book Value		Accumulated Amortization
Customer relationships	1 - 15	$	40,404	$	(19,639	)	$	40,404	$	(15,579	)
Backlog	1 - 2		6,515		(6,515	)		6,515		(6,375	)
Noncompete agreements	2 - 7		2,890		(2,594	)		2,890		(2,380	)
Tradenames	2 - 25		23,695		(5,649	)		23,695		(4,655	)
Total		$	73,504	$	(34,397	)	$	73,504	$	(28,989	)

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Goodwill and Identifiable Intangible Assets, Net (Details) (USD $) In Thousands, unless otherwise specified	12 Months Ended
	Dec. 31, 2012	Sep. 30, 2013
Changes in the carrying amount of goodwill
Balance at the beginning of period	$ 107,093	$ 114,588
Additions	7,495
Balance at the end of period	$ 114,588	$ 114,588

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Stockholders' Equity

9 Months Ended

Sep. 30, 2013

Stockholders' Equity

Stockholders' Equity

9. Stockholders' Equity

• Earnings Per Share

        Basic earnings per share ("EPS") is computed by dividing net income by the weighted average number of shares of common stock outstanding during the period. Diluted EPS is computed considering the dilutive effect of stock options, contingently issuable restricted stock and restricted stock units.

        There were no anti-dilutive stock options for the three and nine months ended September 30, 2013. There were approximately 1.0 million of anti-dilutive stock options excluded from the calculation of diluted EPS for both the three and nine months ended September 30, 2012.

        The following table reconciles the number of shares outstanding with the number of shares used in computing basic and diluted earnings per share for each of the periods presented (in thousands):

	Three Months Ended September 30,					Nine Months Ended September 30,
	2013			2012		2013			2012
Common shares outstanding, end of period(a)		37,296			37,125		37,296			37,125
Effect of using weighted average common shares outstanding		(3	)		30		(112	)		1
Shares used in computing earnings per share—basic		37,293			37,155		37,184			37,126
Effect of shares issuable under stock option plans based on the treasury stock method		245			90		153			91
Effect of contingently issuable restricted shares		93			87		107			48
Shares used in computing earnings per share—diluted		37,631			37,332		37,444			37,265

(a)

Excludes 0.1 million and 0.2 million shares of unvested contingently issuable restricted stock outstanding as of September 30, 2013 and 2012, respectively.

• Share Repurchase Program

        On March 29, 2007, our Board of Directors (the "Board") approved a stock repurchase program to acquire up to 1.0 million shares of our outstanding common stock. Subsequently, the Board has from time to time approved extensions of the program to acquire additional shares. Since the inception of the repurchase program, the Board has approved 6.6 million shares to be repurchased.

        The share repurchases will be made from time to time at our discretion in the open market or privately negotiated transactions as permitted by securities laws and other legal requirements, and subject to market conditions and other factors. The Board may modify, suspend, extend or terminate the program at any time. We repurchased 0.1 million shares during the nine months ended September 30, 2013 at an average price of $14.59 per share. Since the inception of the program in 2007 and as of September 30, 2013, we have repurchased a cumulative total of 6.0 million shares at an average price of $11.00 per share.

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Discontinued Operations

9 Months Ended

Sep. 30, 2013

Discontinued Operations

Discontinued Operations

5. Discontinued Operations

        During the fourth quarter of 2012, we substantially completed the shutdown of our operation located in Delaware. The after tax loss for the three months ended September 30, 2013 was less than $0.1 million, while the after tax loss for the three months ended September 30, 2012 was $0.1 million. The after tax loss for the nine months ended September 30, 2013 and 2012 was $0.1 million and $0.2 million, respectively. These results have been recorded in discontinued operations under "Loss from discontinued operations, net of income tax expense (benefit)".

        Our consolidated statements of operations and the related earnings per share amounts have been restated to reflect the effects of the discontinued operations. No interest expense is allocated to discontinued operations.

        Revenue and pre-tax loss related to discontinued operations are as follows (in thousands):

	Three Months Ended September 30,						Nine Months Ended September 30,
	2013			2012			2013			2012
Revenue	$	—		$	299		$	22		$	4,385
Pre-tax loss	$	(43	)	$	(21	)	$	(136	)	$	(200	)

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CONSOLIDATED STATEMENTS OF CASH FLOWS (USD $) In Thousands, unless otherwise specified	3 Months Ended		9 Months Ended
	Sep. 30, 2013	Sep. 30, 2012	Sep. 30, 2013	Sep. 30, 2012
CASH FLOWS FROM OPERATING ACTIVITIES
Net income including noncontrolling interests	$ 11,612	$ 5,325	$ 22,621	$ 6,704
Adjustments to reconcile net income to net cash provided by (used in) operating activities-
Amortization of identifiable intangible assets	1,739	2,411	5,408	6,557
Depreciation expense	2,866	2,921	8,511	8,924
Bad debt expense	(60)	(18)	(378)	2,468
Deferred tax expense (benefit)	692	641	1,168	(204)
Amortization of debt financing costs	65	57	180	172
Gain on sale of assets	(117)	(99)	(367)	(554)
Changes in the fair value of contingent earn-out obligations	(750)	38	(696)	105
Stock-based compensation expense	523	462	3,243	2,106
(Increase) decrease in-
Receivables, net	23,944	16,019	(6,976)	(3,887)
Inventories	315	557	302	925
Prepaid expenses and other current assets	(122)	158	(11)	737
Costs and estimated earnings in excess of billings	(886)	558	(3,996)	(2,681)
Other noncurrent assets	(186)	(593)	63	(2,535)
Increase (decrease) in-
Accounts payable and accrued liabilities	671	(9,178)	5,413	(14,878)
Billings in excess of costs and estimated earnings	(13,517)	(2,888)	(11,248)	(1,240)
Other long-term liabilities	644	84	545	713
Net cash provided by operating activities	27,433	16,455	23,782	3,432
CASH FLOWS FROM INVESTING ACTIVITIES:
Purchases of property and equipment	(5,234)	(2,817)	(12,471)	(9,405)
Proceeds from sales of property and equipment	64	205	566	967
Proceeds from businesses sold		43	43	121
Cash paid for acquisitions, earn-outs and intangible assets, net of cash acquired		(428)		(12,656)
Net cash used in investing activities	(5,170)	(2,997)	(11,862)	(20,973)
CASH FLOWS FROM FINANCING ACTIVITIES:
Net borrowings (payments) on revolving line of credit	5,000	(4,000)	5,000	14,000
Payments on other long-term debt	(3,400)	(300)	(5,400)	(4,400)
Debt financing costs			(552)
Payments of dividends to shareholders	(2,052)	(1,859)	(5,818)	(5,641)
Share repurchase program	(1,177)	(512)	(1,832)	(1,424)
Shares received in lieu of tax withholding	8	8	(614)	(535)
Excess tax benefit of stock-based compensation	(17)	25	226	(101)
Proceeds from exercise of options	1,334	34	1,618	70
Net cash provided by (used in) financing activities	(304)	(6,604)	(7,372)	1,969
NET INCREASE (DECREASE) IN CASH AND CASH EQUIVALENTS	21,959	6,854	4,548	(15,572)
CASH AND CASH EQUIVALENTS, beginning of period	23,346	28,811	40,757	51,237
CASH AND CASH EQUIVALENTS, end of period	$ 45,305	$ 35,665	$ 45,305	$ 35,665

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Commitments and Contingencies (Details) (Surety)	9 Months Ended
	Sep. 30, 2013
Minimum
Surety
Percentage of business which has required bonds	25.00%
Maximum
Surety
Percentage of business which has required bonds	35.00%

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Fair Value Measurements (Tables)

9 Months Ended

Sep. 30, 2013

Fair Value Measurements

Summary of fair values and levels within the fair value hierarchy in which the fair value measurements fall for assets and liabilities measured on a recurring basis

The following table summarizes the fair values and levels within the fair value hierarchy in which the fair value measurements fall for assets and liabilities measured on a recurring basis as of September 30, 2013 (in thousands):

			Fair Value Measurements at Reporting Date Using
	Total		Quoted Prices In Active Markets for Identical Assets (Level 1)		Significant Other Observable Inputs (Level 2)		Significant Unobservable Inputs (Level 3)
Cash and cash equivalents	$	45,305	$	45,305	$	—	$	—
Life insurance—cash surrender value	$	2,753	$	—	$	2,753	$	—
Contingent earn-out obligations	$	1,270	$	—	$	—	$	1,270

Schedule of reconciliation of the fair value of contingent earn-out obligations that use significant unobservable inputs (Level 3)

The table below presents a reconciliation of the fair value of our contingent earn-out obligations that use significant unobservable inputs (Level 3) (in thousands).

Balance at beginning of year	$	1,966
Issuances		—
Settlements		—
Adjustments to fair value		(696	)
Balance at end of period	$	1,270

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Commitments and Contingencies

9 Months Ended

Sep. 30, 2013

Commitments and Contingencies

Commitments and Contingencies

8. Commitments and Contingencies

• Claims and Lawsuits

        We are subject to certain legal and regulatory claims, including lawsuits arising in the normal course of business. We maintain various insurance coverages to minimize financial risk associated with these claims. We have estimated and provided accruals for probable losses and related legal fees associated with certain litigation in the accompanying consolidated financial statements. While we cannot predict the outcome of these proceedings, in management's opinion and based on reports of counsel, any liability arising from these matters individually and in the aggregate will not have a material effect on our operating results, cash flows or financial condition, after giving effect to provisions already recorded.

• Surety

        Many customers, particularly in connection with new construction, require us to post performance and payment bonds issued by a financial institution known as a surety. If we fail to perform under the terms of a contract or to pay subcontractors and vendors who provided goods or services under a contract, the customer may demand that the surety make payments or provide services under the bond. We must reimburse the surety for any expenses or outlays it incurs. To date, we are not aware of any losses to our sureties in connection with bonds the sureties have posted on our behalf, and do not expect such losses to be incurred in the foreseeable future.

        Surety market conditions remain challenging as a result of significant losses incurred by many sureties in recent periods, both in the construction industry as well as in certain larger corporate bankruptcies. As a result, less bonding capacity is available in the market and terms have become more restrictive. Further, under standard terms in the surety market, sureties issue bonds on a project-by-project basis, and can decline to issue bonds at any time. Historically, approximately 25% to 35% of our business has required bonds. While we have strong surety relationships to support our bonding needs, current market conditions as well as changes in the sureties' assessment of our operating and financial risk could cause the sureties to decline to issue bonds for our work. If that were to occur, the alternatives include doing more business that does not require bonds, posting other forms of collateral for project performance such as letters of credit or cash, and seeking bonding capacity from other sureties. We would likely also encounter concerns from customers, suppliers and other market participants as to our creditworthiness. While we believe our general operating and financial characteristics, including a significant amount of cash on our balance sheet, would enable us to ultimately respond effectively to an interruption in the availability of bonding capacity, such an interruption would likely cause our revenue and profits to decline in the near term.

• Self-Insurance

        We are substantially self-insured for workers' compensation, employer's liability, auto liability, general liability and employee group health claims, in view of the relatively high per-incident deductibles we absorb under our insurance arrangements for these risks. Losses up to deductible amounts are estimated and accrued based upon known facts, historical trends and industry averages. Loss estimates associated with the larger and longer-developing risks, such as workers' compensation, auto liability and general liability, are reviewed by a third-party actuary quarterly.

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Long-Term Debt Obligations (Tables)

9 Months Ended

Sep. 30, 2013

Long-Term Debt Obligations

Schedule of components of long-term debt obligations

Long-term debt obligations consist of the following (in thousands):

	September 30, 2013			December 31, 2012
Revolving credit facility	$	5,000		$	—
Other debt		—			2,400
Notes to former owners		2,000			5,000
Total debt		7,000			7,400
Less—current portion		(2,000	)		(300	)
Total long-term portion of debt	$	5,000		$	7,100

Summary of additional margins

	Consolidated Total Indebtedness to Credit Facility Adjusted EBITDA
	Less than 0.75			0.75 to 1.50			1.50 to 2.25			2.25 or greater
Additional Per Annum Interest Margin Added Under:
Base Rate Loan Option		0.25	%		0.50	%		0.75	%		1.00	%
Eurodollar Rate Loan Option		1.25	%		1.50	%		1.75	%		2.00	%

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Discontinued Operations (Tables)

9 Months Ended

Sep. 30, 2013

Discontinued Operations

Schedule of revenue and pre-tax loss related to discontinued operations

Revenue and pre-tax loss related to discontinued operations are as follows (in thousands):

	Three Months Ended September 30,						Nine Months Ended September 30,
	2013			2012			2013			2012
Revenue	$	—		$	299		$	22		$	4,385
Pre-tax loss	$	(43	)	$	(21	)	$	(136	)	$	(200	)

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Document and Entity Information	9 Months Ended
	Sep. 30, 2013	Oct. 23, 2013	Dec. 31, 2012
Document and Entity Information
Entity Registrant Name	COMFORT SYSTEMS USA INC
Entity Central Index Key	0001035983
Document Type	10-Q
Document Period End Date	Sep. 30, 2013
Amendment Flag	false
Current Fiscal Year End Date	--12-31
Entity Current Reporting Status	Yes
Entity Filer Category	Accelerated Filer
Entity Common Stock, Shares Outstanding		37,355,508
Treasury Stock, Shares	3,767,857	3,767,857	3,879,299
Document Fiscal Year Focus	2013
Document Fiscal Period Focus	Q3

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Goodwill and Identifiable Intangible Assets, Net (Tables)

9 Months Ended

Sep. 30, 2013

Goodwill and Identifiable Intangible Assets, Net

Schedule of changes in the carrying amount of goodwill

The changes in the carrying amount of goodwill are as follows (in thousands):

	September 30, 2013		December 31, 2012
Balance at beginning of year	$	114,588	$	107,093
Additions		—		7,495
Balance at end of period	$	114,588	$	114,588

Schedule of components of identifiable intangible assets

Identifiable intangible assets consist of the following (dollars in thousands):

		September 30, 2013					December 31, 2012
	Estimated Useful Lives in Years	Gross Book Value		Accumulated Amortization			Gross Book Value		Accumulated Amortization
Customer relationships	1 - 15	$	40,404	$	(19,639	)	$	40,404	$	(15,579	)
Backlog	1 - 2		6,515		(6,515	)		6,515		(6,375	)
Noncompete agreements	2 - 7		2,890		(2,594	)		2,890		(2,380	)
Tradenames	2 - 25		23,695		(5,649	)		23,695		(4,655	)
Total		$	73,504	$	(34,397	)	$	73,504	$	(28,989	)