<?xml version="1.0"?>
<ownershipDocument>
    <schemaVersion>X0201</schemaVersion>

    <documentType>4</documentType><periodOfReport>2003-09-30</periodOfReport>
    <issuer>
        <issuerCik>0001008554</issuerCik>
        <issuerName>HUMBOLDT BANCORP</issuerName>
        <issuerTradingSymbol>HBEK</issuerTradingSymbol></issuer><reportingOwner>
        <reportingOwnerId>
            <rptOwnerCik>0001196560</rptOwnerCik>
            <rptOwnerName>MOSS KELVIN H</rptOwnerName>
        </reportingOwnerId>
        <reportingOwnerAddress>
            <rptOwnerStreet1>C/O HUMBOLDT BANCORP</rptOwnerStreet1>
            <rptOwnerStreet2>2998 DOUGLAS BLVD., SUITE 330</rptOwnerStreet2>
            <rptOwnerCity>ROSEVILLE</rptOwnerCity>
            <rptOwnerState>CA</rptOwnerState>
            <rptOwnerZipCode>95661</rptOwnerZipCode>
            <rptOwnerStateDescription></rptOwnerStateDescription>
        </reportingOwnerAddress>
            <reportingOwnerRelationship>
<isDirector>1</isDirector><isOfficer>0</isOfficer><isTenPercentOwner>0</isTenPercentOwner><isOther>0</isOther></reportingOwnerRelationship></reportingOwner><derivativeTable><derivativeTransaction><securityTitle><value>Deferred Rights</value></securityTitle><conversionOrExercisePrice><value>0</value><footnoteId id="F1"/></conversionOrExercisePrice><transactionDate><value>2003-09-30</value></transactionDate><transactionCoding><transactionFormType>4</transactionFormType><transactionCode>A</transactionCode><equitySwapInvolved>0</equitySwapInvolved></transactionCoding><transactionAmounts><transactionShares><value>207</value><footnoteId id="F2"/></transactionShares><transactionPricePerShare><value>15.45</value></transactionPricePerShare><transactionAcquiredDisposedCode><value>A</value></transactionAcquiredDisposedCode></transactionAmounts><exerciseDate><value>1988-08-08</value><footnoteId id="F1"/></exerciseDate><expirationDate><value>1988-08-08</value><footnoteId id="F1"/></expirationDate><underlyingSecurity><underlyingSecurityTitle><value>Common Stock </value></underlyingSecurityTitle><underlyingSecurityShares><value>207</value><footnoteId id="F2"/></underlyingSecurityShares></underlyingSecurity><postTransactionAmounts><sharesOwnedFollowingTransaction><value>6752</value></sharesOwnedFollowingTransaction></postTransactionAmounts><ownershipNature><directOrIndirectOwnership><value>D</value></directOrIndirectOwnership><natureOfOwnership><value/></natureOfOwnership></ownershipNature></derivativeTransaction></derivativeTable><footnotes><footnote id="F1">Represents the reporting person's director's fee under Humboldt Bancorp's deferred compensation plan. Under the plan, the director has the right to defer their director's fee to be paid in common stock upon resignation or retirement. The conversion price of the derivative security is 1 for 1, the number of shares purchased for the month are based on the closing price on the last trade date of the month for which the director fees are paid. </footnote><footnote id="F2">Adjusted for Cash Dividend paid September 22, 03, $0.03/Share (13 shares issued). The net of 194 shares purchased through the deferral plan for September 2003. </footnote></footnotes><remarks/><ownerSignature><signatureName>Kelvin H. Moss</signatureName><signatureDate>2003-10-01</signatureDate></ownerSignature><ownerSignature><signatureName>Signed by Patrick J. Rusnak, Power of Attorney on File</signatureName><signatureDate>2003-10-01</signatureDate></ownerSignature></ownershipDocument>

