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CONDENSED CONSOLIDATED STATEMENTS OF CASH FLOWS - USD ($)
$ in Thousands
6 Months Ended
Jun. 30, 2016
Jun. 30, 2015
Operating Activities    
Net loss $ (31,458) $ (33,286)
Adjustments for non-cash items:    
Depreciation and amortization 55,336 30,292
Accretion of debt discount and debt issuance costs 8,624 7,387
Loss on prepayment of Senior Notes 5,777  
Provision for inventory obsolescence 403 514
Loss on disposal of property and equipment   45
Stock-based compensation 8,238 6,066
Change in fair value of contingent consideration and unfavorable contract (73) (2,214)
Deferred income taxes (12,599) (11,337)
Excess tax benefit from stock-based compensation (436) (2,273)
Other 472 277
Changes in assets and liabilities:    
Accounts receivable (8,354) (32,743)
Receivables from collaborative partners 67 322
Inventories (346) 9,156
Prepaid and other assets (4,912) (2,256)
Income taxes receivable   (9,861)
Accounts payable and other accrued liabilities (6,311) 58,831
Interest payable (2,889) 18,160
Net cash provided by operating activities 11,539 37,080
Investing Activities    
Purchases of property and equipment (2,538) (1,134)
Acquisition of business   (1,050,000)
Purchases of marketable securities (26,570) (18,108)
Maturities of marketable securities 103,707 67,105
Net cash provided by (used in) investing activities 74,599 (1,002,137)
Financing Activities    
Proceeds from the issuance of Senior Notes   562,063
Senior Notes issuance costs   (511)
Repayment of Senior Notes (100,000)  
Repayment fees for repayment of Senior Notes (5,000)  
Proceeds from issuance of common stock 5,163 6,658
Excess tax benefit from stock-based compensation 436 2,273
Net cash (used in) provided by financing activities (99,401) 570,483
Net decrease in cash and cash equivalents (13,263) (394,574)
Cash and cash equivalents at beginning of year 101,084 488,668
Cash and cash equivalents at end of period 87,821 94,094
Supplemental Disclosure of Cash Flow Information    
Net cash paid for income taxes 78 40
Cash paid for interest 35,823 4,121
Capitalized expenditures incurred but not yet paid $ 124 $ 437